RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 FOXP2O15409 715 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 RAD51CO43502 376 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 E2F6O75461 281 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 MOCS3O95396 460 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 BMP15O95972 392 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 MMP1P03956 469 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 CHGBP05060 677 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 CTSBP07858 339 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 PARP1P09874 1014 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 ZNF24P17028 368 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 MATR3P43243 847 aaKnown RBP eCLIP5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 POLE2P56282 527 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 EIF4A1P60842 406 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 MRPS25P82663 173 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 LSAMPQ13449 338 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 TRIM29Q14134 588 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 GSTA3Q16772 222 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 SLC4A8Q2Y0W8 1093 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 SH2D4BQ5SQS7 431 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 WASHC2DQ5SRD0 308 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 ZNF658Q5TYW1 1059 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 SFMBT2Q5VUG0 894 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 TRIM68Q6AZZ1 485 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 RINLQ6ZS11 566 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 FAM196AQ6ZSG2 479 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 ARHGAP27Q6ZUM4 889 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 CROCCP2Q86T23 111 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 FAM114A1Q8IWE2 563 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 RNF168Q8IYW5 571 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 LRRC34Q8IZ02 419 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 USP38Q8NB14 1042 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 SMC1BQ8NDV3 1235 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 IL17REQ8NFR9 667 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 TBC1D16Q8TBP0 767 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 ZNF526Q8TF50 670 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 C17orf50Q8WW18 174 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 DNAJC9Q8WXX5 260 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 ZNF333Q96JL9 665 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 AIFM3Q96NN9 605 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 ERGIC2Q96RQ1 377 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 PYM1Q9BRP8 204 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 MLXIPQ9HAP2 919 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 RMND1Q9NWS8 449 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 DLGAP2Q9P1A6 1054 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 FBXL5Q9UKA1 691 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 PLAGL2Q9UPG8 496 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 EFR3BQ9Y2G0 817 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 BZW2Q9Y6E2 419 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 XDHP47989 1333 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 WNK3Q9BYP7 1800 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 MYH2Q9UKX2 1941 aa5.12□□□□□ -1.59
CDC42BPA-213ENST00000488131 SIPA1L3O60292 1781 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 HEG1Q9ULI3 1381 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 TLR3O15455 904 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 RANBP6O60518 1105 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 SUN1O94901 812 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 TJP3O95049 919 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 UNC5CO95185 931 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 LMNAP02545 664 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 FAM200BP0CF97 657 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 CHN1P15882 459 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 IARSP41252 1262 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 CDK8P49336 464 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 METAP2P50579 478 aaKnown RBP eCLIP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 KIF11P52732 1056 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 RAD23BP54727 409 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 CYP27A1Q02318 531 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 MPP3Q13368 585 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 BTG3Q14201 252 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 KRT71Q3SY84 523 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 ODF2Q5BJF6 829 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 TNFAIP8L3Q5GJ75 292 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 SPDYAQ5MJ70 313 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 SNAP47Q5SQN1 464 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 RNF43Q68DV7 783 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 KSR2Q6VAB6 950 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 USP49Q70CQ1 688 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 CHST3Q7LGC8 479 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 SMYD4Q8IYR2 804 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 AGGF1Q8N302 714 aaeCLIP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 RBBP8NLQ8NC74 664 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 OR2W6PQ8NHA6 318 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 NCOA7Q8NI08 942 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 PIGOQ8TEQ8 1089 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 NELFBQ8WX92 580 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 SLC7A3Q8WY07 619 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 WASF1Q92558 559 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 INPP5DQ92835 1189 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 GATA6Q92908 595 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 PPP2R3CQ969Q6 453 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 UTP4Q969X6 686 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 FERMT2Q96AC1 680 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 NOX5Q96PH1 765 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 KRT12Q99456 494 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.11□□□□□ -1.591e-7■■□□□ 12.9
CDC42BPA-213ENST00000488131 TMEM109Q9BVC6 243 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 ZCWPW1Q9H0M4 648 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 CSRNP2Q9H175 543 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 TMEM165Q9HC07 324 aa5.11□□□□□ -1.59
CDC42BPA-213ENST00000488131 PCDH18Q9HCL0 1135 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms