RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	MLH1	P40692	756 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	SLC19A1	P41440	591 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	LIG4	P49917	911 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	YARS	P54577	528 aa	Known RBP	10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	BCAR1	P56945	870 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	ASIC1	P78348	528 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	BMS1	Q14692	1282 aa	Known RBP	10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	SKIV2L	Q15477	1246 aa	Known RBP	10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	MPZL3	Q6UWV2	235 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZPBP2	Q6X784	338 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	LRRC55	Q6ZSA7	311 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	STXBP4	Q6ZWJ1	553 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZBTB33	Q86T24	672 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	SFR1	Q86XK3	245 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	KLHL23	Q8NBE8	558 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	MRPL38	Q96DV4	380 aa	Known RBP	10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	CCDC34	Q96HJ3	373 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	CHAMP1	Q96JM3	812 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	GAD1	Q99259	594 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	SPSB2	Q99619	263 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	GDPD2	Q9HCC8	539 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	ALG13	Q9NP73	1137 aa	Known RBP	10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	TBC1D13	Q9NVG8	400 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	KBTBD4	Q9NVX7	518 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	SNTG2	Q9NY99	539 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	SPG21	Q9NZD8	308 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	ANKFY1	Q9P2R3	1169 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	USP25	Q9UHP3	1055 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	TBX20	Q9UMR3	447 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	PLAGL2	Q9UPG8	496 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	GDA	Q9Y2T3	454 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	TRANK1	O15050	2925 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	CHD7	Q9P2D1	2997 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZMYM2	Q9UBW7	1377 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	LPXN	O60711	386 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	TOM1L1	O75674	476 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	FGF18	O76093	207 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	GCNT3	O95395	438 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	EDN1	P05305	212 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	ITGB1	P05556	798 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	LINC00271	P0C7V0	271 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	MCF2	P10911	925 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	HARS	P12081	509 aa	Known RBP	10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	PFKFB1	P16118	471 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	NMT1	P30419	496 aa	Known RBP	10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	SYK	P43405	635 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	AFM	P43652	599 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	UBE3A	Q05086	875 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	ALCAM	Q13740	583 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	TIGD5	Q53EQ6	642 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	PLA2G2C	Q5R387	149 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	EEF1DP3	Q658K8	133 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	LIAT1	Q6ZQX7	453 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	TAS1R3	Q7RTX0	852 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	FSIP1	Q8NA03	581 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	MICAL1	Q8TDZ2	1067 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	MRPS27	Q92552	414 aa	Known RBP	10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	PPP2R3C	Q969Q6	453 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	HVCN1	Q96D96	273 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	DNAJC19	Q96DA6	116 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	THAP11	Q96EK4	314 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	TMEM169	Q96HH4	297 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	NRDE2	Q9H7Z3	1164 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	CHMP5	Q9NZZ3	219 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	KLK14	Q9P0G3	267 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	TBC1D7	Q9P0N9	293 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	SERTAD1	Q9UHV2	236 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	EXOC7	Q9UPT5	735 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	FAN1	Q9Y2M0	1017 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	SLC27A5	Q9Y2P5	690 aa		10.42	□□□□□ -0.74
PTBP3-208	ENST00000487997	MYO7A	Q13402	2215 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997		A0A1W2PQ27	194 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997		A0A1W2PQ64	194 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997		A0A1W2PQD8	194 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	GRM6	O15303	877 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	RECQL4	O94761	1208 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	CSPG5	O95196	566 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	TH	P07101	528 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	SLFN14	P0C7P3	912 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	GRM5	P41594	1212 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	OR1G1	P47890	313 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	SCNN1G	P51170	649 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	OSTN	P61366	133 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	GTF2B	Q00403	316 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	PLCB3	Q01970	1234 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	GRIK3	Q13003	919 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	KYAT1	Q16773	422 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	SLFN12L	Q6IEE8	588 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	PDE12	Q6L8Q7	609 aa	Known RBP	10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	TRIM67	Q6ZTA4	783 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZNF720	Q7Z2F6	126 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	SYCP3	Q8IZU3	236 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	SPPL3	Q8TCT6	385 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	POF1B	Q8WVV4	589 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	KCNN1	Q92952	543 aa		10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	CCDC47	Q96A33	483 aa	Known RBP	10.41	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZFP42	Q96MM3	310 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms