RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 A0A1B0GTW7 788 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 DVL2O14641 736 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 ORC4O43929 436 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 ADCY3O60266 1144 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 SREBF1P36956 1147 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 GRIA3P42263 894 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 ERV3-1Q14264 604 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 RABEP1Q15276 862 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 CYP2A13Q16696 494 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 UNQ6494/PRO21346Q6UXR6 183 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 TAS1R1Q7RTX1 841 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 LRRC47Q8N1G4 583 aaKnown RBP3.55□□□□□ -1.84
USP9X-208ENST00000487625 PHACTR3Q96KR7 559 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 SH2D3AQ9BRG2 576 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 NOL10Q9BSC4 688 aaKnown RBP3.55□□□□□ -1.84
USP9X-208ENST00000487625 SPATA9Q9BWV2 254 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 NCOA5Q9HCD5 579 aaKnown RBP3.55□□□□□ -1.84
USP9X-208ENST00000487625 MSRB2Q9Y3D2 182 aa3.55□□□□□ -1.84
USP9X-208ENST00000487625 CCDC151A5D8V7 595 aa3.54□□□□□ -1.84
USP9X-208ENST00000487625 GTPBP1O00178 669 aaKnown RBP3.54□□□□□ -1.84
USP9X-208ENST00000487625 CERS1P27544 350 aa3.54□□□□□ -1.84
USP9X-208ENST00000487625 VAV2P52735 878 aa3.54□□□□□ -1.84
USP9X-208ENST00000487625 FOXB2Q5VYV0 432 aa3.54□□□□□ -1.84
USP9X-208ENST00000487625 FAM43AQ8N2R8 423 aa3.54□□□□□ -1.84
USP9X-208ENST00000487625 NSMCE1Q8WV22 266 aa3.54□□□□□ -1.84
USP9X-208ENST00000487625 ZNF669Q96BR6 464 aaPredicted RBP3.54□□□□□ -1.84
USP9X-208ENST00000487625 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.54□□□□□ -1.84
USP9X-208ENST00000487625 TUBA8Q9NY65 449 aaPredicted RBP3.54□□□□□ -1.84
USP9X-208ENST00000487625 FGFR4P22455 802 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 MMP13P45452 471 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 KIF11P52732 1056 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 ADCY2Q08462 1091 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 FAM209AQ5JX71 171 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 C18orf65Q6ZTR6 163 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 ZFP28Q8NHY6 868 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 HIST1H2AHQ96KK5 128 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 HIST1H2AJQ99878 128 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 TMEM79Q9BSE2 394 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 PFDN2Q9UHV9 154 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 KCNE5Q9UJ90 142 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 ICKQ9UPZ9 632 aa3.53□□□□□ -1.84
USP9X-208ENST00000487625 TRBV23-1A0A0A0MS06 115 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 NTN3O00634 580 aaPredicted RBP3.52□□□□□ -1.85
USP9X-208ENST00000487625 PDPK1O15530 556 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 DIAPH1O60610 1272 aaKnown RBP3.52□□□□□ -1.85
USP9X-208ENST00000487625 HILS1P60008 231 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 SUMO1P63165 101 aaKnown RBP3.52□□□□□ -1.85
USP9X-208ENST00000487625 LRRC41Q15345 812 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 CEP78Q5JTW2 689 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 KAZNQ674X7 775 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 OTOP1Q7RTM1 612 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 IRF2BP2Q7Z5L9 587 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 CEP95Q96GE4 821 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 EXOC2Q96KP1 924 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 TRMOQ9BU70 441 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 BOCQ9BWV1 1114 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 TRIM55Q9BYV6 548 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 SERGEFQ9UGK8 458 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 AFG3L2Q9Y4W6 797 aa3.52□□□□□ -1.85
USP9X-208ENST00000487625 PPP6CO00743 305 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 ALPLP05186 524 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 PLCD1P51178 756 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 SSRP1Q08945 709 aaKnown RBP3.51□□□□□ -1.85
USP9X-208ENST00000487625 RASGRF1Q13972 1273 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 UBE3CQ15386 1083 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 SUMO4Q6EEV6 95 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 TMPRSS12Q86WS5 348 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 C2orf69Q8N8R5 385 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 ZBTB38Q8NAP3 1195 aaPredicted RBP3.51□□□□□ -1.85
USP9X-208ENST00000487625 TFAP2BQ92481 460 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 CDC6Q99741 560 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 FDXACB1Q9BRP7 624 aaPredicted RBP3.51□□□□□ -1.85
USP9X-208ENST00000487625 IGSF5Q9NSI5 407 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 PODXL2Q9NZ53 605 aa3.51□□□□□ -1.85
USP9X-208ENST00000487625 CCDC85CA6NKD9 419 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 PRSS47A8MTI9 375 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 YY2O15391 372 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 MPPED1O15442 326 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 KRT37O76014 449 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 FAM153BP0C7A2 387 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 GABREP78334 506 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 HSD11B2P80365 405 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 SF3B3Q15393 1217 aaKnown RBP3.5□□□□□ -1.85
USP9X-208ENST00000487625 MTERF2Q49AM1 385 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 ATXN7L2Q5T6C5 722 aaPredicted RBP3.5□□□□□ -1.85
USP9X-208ENST00000487625 CKAP2LQ8IYA6 745 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 SLC35B2Q8TB61 432 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 CDC5LQ99459 802 aaKnown RBP3.5□□□□□ -1.85
USP9X-208ENST00000487625 RNPEPQ9H4A4 650 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 PADI4Q9UM07 663 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 AATKQ6ZMQ8 1374 aa3.5□□□□□ -1.85
USP9X-208ENST00000487625 FAM90A10PA6NDY2 464 aa3.49□□□□□ -1.85
USP9X-208ENST00000487625 LINC00473A8K010 186 aa3.49□□□□□ -1.85
USP9X-208ENST00000487625 MAFGO15525 162 aa3.49□□□□□ -1.85
USP9X-208ENST00000487625 STK10O94804 968 aaKnown RBP3.49□□□□□ -1.85
USP9X-208ENST00000487625 SEC24DO94855 1032 aaPredicted RBP3.49□□□□□ -1.85
USP9X-208ENST00000487625 PRPF6O94906 941 aaKnown RBP3.49□□□□□ -1.85
USP9X-208ENST00000487625 EPHA7Q15375 998 aa3.49□□□□□ -1.85
USP9X-208ENST00000487625 TMEM177Q53S58 311 aa3.49□□□□□ -1.85
USP9X-208ENST00000487625 MFSD14BQ5SR56 506 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms