RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 HSD17B14Q9BPX1 270 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 SNX25Q9H3E2 840 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 MYH7P12883 1935 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 AHDC1Q5TGY3 1603 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-214ENST00000487615 ASB14A6NK59 587 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 GARTP22102 1010 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 ATP11AP98196 1134 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 KRT17Q04695 432 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 SLC35G1Q2M3R5 365 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 DARS2Q6PI48 645 aaKnown RBP12.58□□□□□ -0.4
TRA2B-214ENST00000487615 LRIG3Q6UXM1 1119 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 PDIK1LQ8N165 341 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 ERP44Q9BS26 406 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 NGRNQ9NPE2 291 aaKnown RBP12.58□□□□□ -0.4
TRA2B-214ENST00000487615 MMEP08473 750 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 INHBAP08476 426 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 GZMAP12544 262 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 SSTR3P32745 418 aaPredicted RBP12.57□□□□□ -0.4
TRA2B-214ENST00000487615 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
TRA2B-214ENST00000487615 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
TRA2B-214ENST00000487615 ANKRD20A3Q5VUR7 823 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 ZNF677Q86XU0 584 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 TMC2Q8TDI7 906 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 AP5M1Q9H0R1 490 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 H3BQF6 201 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 VWA5AO00534 786 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 TBC1D12O60347 775 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 SGPL1O95470 568 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 PSMC1P62191 440 aaKnown RBP12.57□□□□□ -0.4
TRA2B-214ENST00000487615 CDR2Q01850 454 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 ARSHQ5FYA8 562 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 DNAAF5Q86Y56 855 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 SNF8Q96H20 258 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 SAYSD1Q9NPB0 183 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 CHORDC1Q9UHD1 332 aaPredicted RBP12.57□□□□□ -0.4
TRA2B-214ENST00000487615 CD2APQ9Y5K6 639 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 ASTN1O14525 1302 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 ANKRD65E5RJM6 399 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 KRT7P08729 469 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 CASKIN2Q8WXE0 1202 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 ATP2A3Q93084 1043 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 RPS6KC1Q96S38 1066 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 MAD1L1Q9Y6D9 718 aa12.57□□□□□ -0.4
TRA2B-214ENST00000487615 PPP1R37O75864 691 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 SUPT20HL2P0C7V6 817 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 PRKCIP41743 596 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 ZNF131P52739 623 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 TAP1Q03518 808 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 BBS9Q3SYG4 887 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 CFAP157Q5JU67 520 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 PDZD4Q76G19 769 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-214ENST00000487615 ATL2Q8NHH9 583 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 GLIS2Q9BZE0 524 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-214ENST00000487615 SLC38A10Q9HBR0 1119 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 BAIAP2L1Q9UHR4 511 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 GMNCA6NCL1 334 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 DDX3XO00571 662 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRA2B-214ENST00000487615 SLC25A27O95847 323 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 GTF2H1P32780 548 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 GUCY1A3Q02108 690 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 CDO1Q16878 200 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 EPC2Q52LR7 807 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 MMS22LQ6ZRQ5 1243 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 TAS1R2Q8TE23 839 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 PYROXD1Q8WU10 500 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 HSPH1Q92598 858 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 ZSWIM1Q9BR11 485 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 GANQ9H2C0 597 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 SMARCAD1Q9H4L7 1026 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 DNAJC18Q9H819 358 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 PCDHGC5Q9Y5F6 944 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 CYP11B1P15538 503 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 AMPD2Q01433 879 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 SGSM1Q2NKQ1 1148 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 WDR72Q3MJ13 1102 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 IER5Q5VY09 327 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 TMEM117Q9H0C3 514 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 TOPORSQ9NS56 1045 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-214ENST00000487615 SYNJ2BP-COX16A0A087WUM0 186 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 ZC3H11AO75152 810 aaKnown RBP eCLIP12.56□□□□□ -0.43e-10■■□□□ 11.5
TRA2B-214ENST00000487615 STAMBPO95630 424 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 MSH2P43246 934 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 MARSP56192 900 aaKnown RBP12.56□□□□□ -0.4
TRA2B-214ENST00000487615 TFDP2Q14188 446 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 MUM1L1Q5H9M0 696 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 ACAD10Q6JQN1 1059 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 SH3BP5LQ7L8J4 393 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 CCDC125Q86Z20 511 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 CCDC110Q8TBZ0 833 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 SLC20A1Q8WUM9 679 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 ASNSD1Q9NWL6 643 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 COX16Q9P0S2 106 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 VAV3Q9UKW4 847 aa12.56□□□□□ -0.4
TRA2B-214ENST00000487615 TTC7AQ9ULT0 858 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-214ENST00000487615 RASSF2P50749 326 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms