RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 TISP43B9A030 160 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 GRM6O15303 877 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 PRPF6O94906 941 aaKnown RBP12.73□□□□□ -0.37
CLIP2-207ENST00000487447 POMCP01189 267 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 ITGB1P05556 798 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 GALTP07902 379 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 CLTAP09496 248 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 GARTP22102 1010 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 SLC11A1P49279 550 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 SNRPFP62306 86 aaKnown RBP12.73□□□□□ -0.37
CLIP2-207ENST00000487447 STK4Q13043 487 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 SLC10A6Q3KNW5 377 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 KLHL23Q8NBE8 558 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 SPPL3Q8TCT6 385 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 BICD1Q96G01 975 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 ACAP3Q96P50 834 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 PLEKHA5Q9HAU0 1116 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 PARP2Q9UGN5 583 aa12.73□□□□□ -0.37
CLIP2-207ENST00000487447 TTC26A0AVF1 554 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 KIAA0391O15091 583 aaKnown RBP12.72□□□□□ -0.37
CLIP2-207ENST00000487447 TGFB1I1O43294 461 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 FGF18O76093 207 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 DNAJB1P25685 340 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
CLIP2-207ENST00000487447 TUSC3Q13454 348 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 CRELD2Q6UXH1 353 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-207ENST00000487447 TMEM173Q86WV6 379 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-207ENST00000487447 C12orf56Q8IXR9 622 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 THNSL1Q8IYQ7 743 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 RNF168Q8IYW5 571 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-207ENST00000487447 MRPL38Q96DV4 380 aaKnown RBP12.72□□□□□ -0.37
CLIP2-207ENST00000487447 RPS6KC1Q96S38 1066 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 TSPAN18Q96SJ8 248 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 MSTO1Q9BUK6 570 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 EXOC1Q9NV70 894 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 MARCH5Q9NX47 278 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 KLK14Q9P0G3 267 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 GDAQ9Y2T3 454 aa12.72□□□□□ -0.37
CLIP2-207ENST00000487447 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 TMEM189-UBE2V1I3L0A0 370 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 NRP1O14786 923 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 FSCN2O14926 492 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 ZC3H11AO75152 810 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 THP07101 528 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 PBX3P40426 434 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 TNFSF9P41273 254 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 ALDH7A1P49419 539 aaKnown RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 TFF2Q03403 129 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 RNASELQ05823 741 aaKnown RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 PNOCQ13519 176 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 ZBTB6Q15916 424 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 ENOX2Q16206 610 aaKnown RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 PTPROQ16827 1216 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 SEZ6Q53EL9 994 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 COBLL1Q53SF7 1204 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 ZBTB41Q5SVQ8 909 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 SPOUT1Q5T280 376 aaKnown RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 BCL7CQ8WUZ0 217 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 POF1BQ8WVV4 589 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 IGSF21Q96ID5 467 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 FBXL18Q96ME1 805 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 ZMAT2Q96NC0 199 aaKnown RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 NECAB3Q96P71 396 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 GSDMAQ96QA5 445 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 SLC39A2Q9NP94 309 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 CGNQ9P2M7 1197 aaKnown RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 STK39Q9UEW8 545 aa12.71□□□□□ -0.37
CLIP2-207ENST00000487447 AGO2Q9UKV8 859 aaKnown RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.71□□□□□ -0.37
CLIP2-207ENST00000487447 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 PRPF40AO75400 957 aaKnown RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 LDHAP00338 332 aaKnown RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 ALDH2P05091 517 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 CXCL8P10145 99 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 HARSP12081 509 aaKnown RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 COL9A1P20849 921 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 OSTNP61366 133 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 COL19A1Q14993 1142 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 SKIV2LQ15477 1246 aaKnown RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 KNOP1Q1ED39 458 aaKnown RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 CD302Q8IX05 232 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 GUF1Q8N442 669 aaKnown RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 POMGNT1Q8WZA1 660 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 CCDC47Q96A33 483 aaKnown RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 UROC1Q96N76 676 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 FAM193BQ96PV7 902 aaPredicted RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 UHRF1Q96T88 793 aaPredicted RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 CBWD1Q9BRT8 395 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 VN1R3Q9BXE9 311 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 KCTD10Q9H3F6 313 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 ALG13Q9NP73 1137 aaKnown RBP12.7□□□□□ -0.38
CLIP2-207ENST00000487447 AGPAT3Q9NRZ7 376 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 LMBRD1Q9NUN5 540 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 RAPGEFL1Q9UHV5 662 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 HOOK1Q9UJC3 728 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms