RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 SIX2Q9NPC8 291 aa8.69□□□□□ -1.02
ZNF541-204ENST00000487275 PAK6Q9NQU5 681 aaPredicted RBP8.69□□□□□ -1.02
ZNF541-204ENST00000487275 RAB20Q9NX57 234 aa8.69□□□□□ -1.02
ZNF541-204ENST00000487275 APEX2Q9UBZ4 518 aa8.69□□□□□ -1.02
ZNF541-204ENST00000487275 FBXL5Q9UKA1 691 aa8.69□□□□□ -1.02
ZNF541-204ENST00000487275 DNAJC12Q9UKB3 198 aa8.69□□□□□ -1.02
ZNF541-204ENST00000487275 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
ZNF541-204ENST00000487275 FHOD1Q9Y613 1164 aa8.69□□□□□ -1.02
ZNF541-204ENST00000487275 SOWAHDA6NJG2 315 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 ARVCFO00192 962 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 RPS6KA5O75582 802 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 CLSTN1O94985 981 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 C4BPAP04003 597 aaKnown RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 TMEM191BP0C7N4 346 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 CXCL8P10145 99 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 HSPA8P11142 646 aaKnown RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 HOXA11P31270 313 aaPredicted RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 HNRNPH3P31942 346 aaKnown RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 CYLC1P35663 651 aaPredicted RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 GRM5P41594 1212 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 STAT1P42224 750 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 WNT7BP56706 349 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 TFAMQ00059 246 aaKnown RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 MGAT3Q09327 533 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 ENOX2Q16206 610 aaKnown RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 MEA1Q16626 185 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 DUOXA2Q1HG44 320 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 TDRD12Q587J7 1177 aaKnown RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 WDR44Q5JSH3 913 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 IQCEQ6IPM2 695 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 DPY19L2P1Q6NXN4 242 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 GJB7Q6PEY0 223 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 FAM228AQ86W67 206 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 FMNL3Q8IVF7 1028 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 C17orf53Q8N3J3 647 aaPredicted RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 LMO3Q8TAP4 145 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 TAS1R2Q8TE23 839 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 ZNF516Q92618 1163 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 SYN2Q92777 582 aaPredicted RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 WNT8BQ93098 351 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 ANKRD36BP1Q96IX9 119 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 NT5C1BQ96P26 610 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 SENP6Q9GZR1 1112 aaPredicted RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 DEF6Q9H4E7 631 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 UBE2TQ9NPD8 197 aaPredicted RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 TRMT13Q9NUP7 481 aaKnown RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 MYO6Q9UM54 1294 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 PLAGL2Q9UPG8 496 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 COQ4Q9Y3A0 265 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 NOC2LQ9Y3T9 749 aaKnown RBP8.68□□□□□ -1.02
ZNF541-204ENST00000487275 MROH7Q68CQ1 1323 aa8.68□□□□□ -1.02
ZNF541-204ENST00000487275 LACTBL1A8MY62 500 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 GPR182O15218 404 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 ZSCAN12O43309 604 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 ZNF500O60304 480 aaPredicted RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 B4GALT4O60513 344 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 ZC3H11AO75152 810 aaKnown RBP eCLIP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 CAND2O75155 1236 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 IPO7O95373 1038 aaKnown RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 HLA-DRAP01903 254 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 TNNC2P02585 160 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 CHRNA1P02708 482 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 YARSP54577 528 aaKnown RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 CDK17Q00537 523 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 PTPRJQ12913 1337 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 NFX1Q12986 1120 aaKnown RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 TRPC3Q13507 836 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 DRAP1Q14919 205 aaPredicted RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 PKN2Q16513 984 aaKnown RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 ARHGAP44Q17R89 818 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 ZACNQ401N2 412 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 TDRD10Q5VZ19 366 aaKnown RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 TWF2Q6IBS0 349 aaKnown RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 PHLDB3Q6NSJ2 640 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 FBXO46Q6PJ61 603 aaPredicted RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 WDR59Q6PJI9 974 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 RAD9BQ6WBX8 426 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 C15orf39Q6ZRI6 1047 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 CD302Q8IX05 232 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 CCDC170Q8IYT3 715 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 PPM1KQ8N3J5 372 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 SLC43A3Q8NBI5 491 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 OR5B17Q8NGF7 314 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 SEMA4DQ92854 862 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 FAM84AQ96KN4 292 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 FAM81BQ96LP2 452 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 CHP1Q99653 195 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 EIF2AQ9BY44 585 aaKnown RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 STK33Q9BYT3 514 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 IMPG2Q9BZV3 1241 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 MTMR12Q9C0I1 747 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 ASB7Q9H672 318 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 NHEJ1Q9H9Q4 299 aaPredicted RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 C1orf112Q9NSG2 853 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 TRMT1Q9NXH9 659 aaKnown RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 SNTG2Q9NY99 539 aa8.67□□□□□ -1.02
ZNF541-204ENST00000487275 AJAP1Q9UKB5 411 aaPredicted RBP8.67□□□□□ -1.02
ZNF541-204ENST00000487275 OGDHLQ9ULD0 1010 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms