RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ZNF211Q13398 564 aaPredicted RBP28.02■■■□□ 2.08
HLA-C-208ENST00000487245 STXBP2Q15833 593 aa28.02■■■□□ 2.08
HLA-C-208ENST00000487245 CYP1B1Q16678 543 aa28.02■■■□□ 2.08
HLA-C-208ENST00000487245 TLCD1Q96CP7 247 aa28.02■■■□□ 2.08
HLA-C-208ENST00000487245 POLR3FQ9H1D9 316 aaPredicted RBP28.02■■■□□ 2.08
HLA-C-208ENST00000487245 ZNF541Q9H0D2 1346 aa28.01■■■□□ 2.07
HLA-C-208ENST00000487245 SPDYE16A6NNV3 312 aaPredicted RBP28.01■■■□□ 2.07
HLA-C-208ENST00000487245 PODXLO00592 558 aa28.01■■■□□ 2.07
HLA-C-208ENST00000487245 HNRNPDLO14979 420 aaKnown RBP28.01■■■□□ 2.07
HLA-C-208ENST00000487245 PRAMEF18Q5VWM3 479 aa28.01■■■□□ 2.07
HLA-C-208ENST00000487245 PRELID2Q8N945 189 aa28.01■■■□□ 2.07
HLA-C-208ENST00000487245 BICD1Q96G01 975 aa28.01■■■□□ 2.07
HLA-C-208ENST00000487245 MEFVO15553 781 aaPredicted RBP28■■■□□ 2.07
HLA-C-208ENST00000487245 HPDP32754 393 aaPredicted RBP28■■■□□ 2.07
HLA-C-208ENST00000487245 PDE6CP51160 858 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 CDR2Q01850 454 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 PACS2Q86VP3 889 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 CENPHQ9H3R5 247 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 PARP2Q9UGN5 583 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 ATG7O95352 703 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 FMO1Q01740 532 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 SEL1L2Q5TEA6 688 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 ZDHHC24Q6UX98 284 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 SV2AQ7L0J3 742 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 HOOK3Q86VS8 718 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 KRT35Q92764 455 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 FAM129AQ9BZQ8 928 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 EFCC1Q9HA90 598 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 UVRAGQ9P2Y5 699 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 GTF3C4Q9UKN8 822 aa28■■■□□ 2.07
HLA-C-208ENST00000487245 ADGRA3Q8IWK6 1321 aa27.99■■■□□ 2.07
HLA-C-208ENST00000487245 EXTL3O43909 919 aa27.99■■■□□ 2.07
HLA-C-208ENST00000487245 CYP11B1P15538 503 aa27.99■■■□□ 2.07
HLA-C-208ENST00000487245 COMTP21964 271 aa27.99■■■□□ 2.07
HLA-C-208ENST00000487245 SOX10P56693 466 aa27.99■■■□□ 2.07
HLA-C-208ENST00000487245 GCNT1Q02742 428 aa27.99■■■□□ 2.07
HLA-C-208ENST00000487245 TAS1R2Q8TE23 839 aa27.99■■■□□ 2.07
HLA-C-208ENST00000487245 POP1Q99575 1024 aaKnown RBP27.99■■■□□ 2.07
HLA-C-208ENST00000487245 EPB41L4BQ9H329 900 aa27.99■■■□□ 2.07
HLA-C-208ENST00000487245 PABPC3Q9H361 631 aaKnown RBP27.99■■■□□ 2.07
HLA-C-208ENST00000487245 CNOT10Q9H9A5 744 aaKnown RBP27.99■■■□□ 2.07
HLA-C-208ENST00000487245 GPRC5DQ9NZD1 345 aa27.99■■■□□ 2.07
HLA-C-208ENST00000487245 TRAPPC3O43617 180 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 KRT71Q3SY84 523 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 SLC47A2Q86VL8 602 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 TRPM4Q8TD43 1214 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 GRHL1Q9NZI5 618 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 NOVA2Q9UNW9 492 aaKnown RBP27.98■■■□□ 2.07
HLA-C-208ENST00000487245 TRPC6Q9Y210 931 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 GMNCA6NCL1 334 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 KIAA0754O94854 1291 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 LIG4P49917 911 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 POLGP54098 1239 aaPredicted RBP27.98■■■□□ 2.07
HLA-C-208ENST00000487245 STRN3Q13033 797 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 EMC2Q15006 297 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 MTERF2Q49AM1 385 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 CROCCP2Q86T23 111 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 GLG1Q92896 1179 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 TRIM31Q9BZY9 425 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 ZNF302Q9NR11 478 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 GGA3Q9NZ52 723 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 FBXO40Q9UH90 709 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 ATP8A1Q9Y2Q0 1164 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 PCDHA3Q9Y5H8 950 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 MAFBQ9Y5Q3 323 aaPredicted RBP27.98■■■□□ 2.07
HLA-C-208ENST00000487245 STYXL1Q9Y6J8 313 aa27.98■■■□□ 2.07
HLA-C-208ENST00000487245 ZNFX1Q9P2E3 1918 aaKnown RBP27.97■■■□□ 2.07
HLA-C-208ENST00000487245 LOC285556D6RIA3 1793 aa27.97■■■□□ 2.07
HLA-C-208ENST00000487245 MMEP08473 750 aa27.97■■■□□ 2.07
HLA-C-208ENST00000487245 SEC24CP53992 1094 aa27.97■■■□□ 2.07
HLA-C-208ENST00000487245 PMS2P54278 862 aa27.97■■■□□ 2.07
HLA-C-208ENST00000487245 SP4Q02446 784 aa27.97■■■□□ 2.07
HLA-C-208ENST00000487245 TAS1R3Q7RTX0 852 aa27.97■■■□□ 2.07
HLA-C-208ENST00000487245 C12orf50Q8NA57 414 aaPredicted RBP27.97■■■□□ 2.07
HLA-C-208ENST00000487245 CENPTQ96BT3 561 aa27.97■■■□□ 2.07
HLA-C-208ENST00000487245 FAM213AQ9BRX8 229 aa27.97■■■□□ 2.07
HLA-C-208ENST00000487245 E7EVH7 732 aa27.96■■■□□ 2.07
HLA-C-208ENST00000487245 COPB2P35606 906 aa27.96■■■□□ 2.07
HLA-C-208ENST00000487245 MARCKSL1P49006 195 aa27.96■■■□□ 2.07
HLA-C-208ENST00000487245 CLDN10P78369 228 aa27.96■■■□□ 2.07
HLA-C-208ENST00000487245 MESDQ14696 234 aa27.96■■■□□ 2.07
HLA-C-208ENST00000487245 PSMD6Q15008 389 aa27.96■■■□□ 2.07
HLA-C-208ENST00000487245 MICALL1Q8N3F8 863 aa27.96■■■□□ 2.07
HLA-C-208ENST00000487245 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.96■■■□□ 2.072e-7■□□□□ 10.1
HLA-C-208ENST00000487245 TOPORSQ9NS56 1045 aaPredicted RBP27.96■■■□□ 2.07
HLA-C-208ENST00000487245 CNOT8Q9UFF9 292 aaKnown RBP27.96■■■□□ 2.07
HLA-C-208ENST00000487245 C5orf60A6NFR6 353 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 OATP04181 439 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 DLATP10515 647 aaKnown RBP27.95■■■□□ 2.07
HLA-C-208ENST00000487245 IFFO1Q0D2I5 559 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 SLFN12LQ6IEE8 588 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 ACAD10Q6JQN1 1059 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 C6orf89Q6UWU4 347 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 C15orf39Q6ZRI6 1047 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 ADAT2Q7Z6V5 191 aaKnown RBP27.95■■■□□ 2.07
HLA-C-208ENST00000487245 ZNF564Q8TBZ8 553 aaPredicted RBP27.95■■■□□ 2.07
HLA-C-208ENST00000487245 DHX38Q92620 1227 aaKnown RBP27.95■■■□□ 2.07
HLA-C-208ENST00000487245 MAGOHBQ96A72 148 aaKnown RBP27.95■■■□□ 2.07
HLA-C-208ENST00000487245 PGM2Q96G03 612 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 TMEM109Q9BVC6 243 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms