RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 GIT2Q14161 759 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 EPHA7Q15375 998 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 HADHQ16836 314 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 RBM26Q5T8P6 1007 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 ATG16L1Q676U5 607 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 PIGWQ7Z7B1 504 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 RHOT1Q8IXI2 618 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 RASGEF1CQ8N431 466 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 KRT35Q92764 455 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 DNAJC19Q96DA6 116 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 NSL1Q96IY1 281 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 MTMR9Q96QG7 549 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 FERMT1Q9BQL6 677 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 C11orf70Q9BRQ4 267 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 MIS12Q9H081 205 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 METTL5Q9NRN9 209 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 PCDHB4Q9Y5E5 795 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 SLIT3O75094 1523 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 COPEO14579 308 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 ATP9AO75110 1047 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 NTSR2O95665 410 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 RARAP10276 462 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 PYGMP11217 842 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 ATP2B4P23634 1241 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 KLRK1P26718 216 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 PEX5P50542 639 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 ROR2Q01974 943 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 KDSRQ06136 332 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 BNIP1Q12981 228 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 RASA3Q14644 834 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 KPNB1Q14974 876 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 MTFR1Q15390 333 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 ZYXQ15942 572 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 KLHL38Q2WGJ6 581 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 EMC10Q5UCC4 262 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 CC2D2BQ6DHV5 1058 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 CASC4Q6P4E1 433 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 MTDHQ86UE4 582 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 GSDMBQ8TAX9 411 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 CDCA7Q9BWT1 371 aaPredicted RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 BCAP29Q9UHQ4 241 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 SLC12A4Q9UP95 1085 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 C1orf167Q5SNV9 1468 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 LIN7AO14910 233 aaPredicted RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 HNRNPDLO14979 420 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 ADAMTS3O15072 1205 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 ABCD1P33897 745 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 CACNA2D1P54289 1103 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 EPHB1P54762 984 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 RRP1BQ14684 758 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 LRRC36Q1X8D7 754 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 BRDTQ58F21 947 aaPredicted RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 MIS18BP1Q6P0N0 1132 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 C16orf86Q6ZW13 317 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 CRLF3Q8IUI8 442 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 LRRC57Q8N9N7 239 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 ATP11CQ8NB49 1132 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 RBM17Q96I25 401 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 RBM41Q96IZ5 413 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 RANBP17Q9H2T7 1088 aaKnown RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 JMJD4Q9H9V9 463 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 EBF2Q9HAK2 575 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 IFT122Q9HBG6 1241 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 PSMC3IPQ9P2W1 217 aaPredicted RBP8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 HEY2Q9UBP5 337 aa8.13□□□□□ -1.11
COL6A4P1-202ENST00000487147 B2RBV5 119 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 ENO1P06733 434 aaKnown RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 KITP10721 976 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 MED21Q13503 144 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 SF3B3Q15393 1217 aaKnown RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 C11orf63Q6NUN7 778 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 IRGCQ6NXR0 463 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 RGS9BPQ6ZS82 235 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PRELID2Q8N945 189 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 CEP70Q8NHQ1 597 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PIP4K2CQ8TBX8 421 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 SLC20A1Q8WUM9 679 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 HIC2Q96JB3 615 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 KLF6Q99612 283 aaPredicted RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 FOXP3Q9BZS1 431 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 ARHGEF10LQ9HCE6 1279 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 AFDNP55196 1824 aaKnown RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 H0YGN5 161 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 SLC26A4O43511 780 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 CD58P19256 250 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PIK3CAP42336 1068 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 CPA2P48052 419 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PTDSS1P48651 473 aaKnown RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 DMP1Q13316 513 aaPredicted RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 ALCAMQ13740 583 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 SEPT6Q14141 434 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PSMD6Q15008 389 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 DAB2IPQ5VWQ8 1189 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 RNF43Q68DV7 783 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 FITM2Q8N6M3 262 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 B4GALNT2Q8NHY0 566 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 TEKT1Q969V4 418 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 TBC1D10AQ9BXI6 508 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 ERVK-5Q9HDB9 667 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms