RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 KMT2EQ8IZD2 1858 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 GBP2P32456 591 aaPredicted RBP26.98■■□□□ 1.91
LIME1-206ENST00000487026 MRE11P49959 708 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 OSTNP61366 133 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 ATP2C1P98194 919 aaPredicted RBP26.98■■□□□ 1.91
LIME1-206ENST00000487026 TCF15Q12870 199 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 MAPK7Q13164 816 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 LNX1Q8TBB1 728 aaPredicted RBP26.98■■□□□ 1.91
LIME1-206ENST00000487026 PNMA5Q96PV4 448 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 CLSTN3Q9BQT9 956 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 KCNK12Q9HB15 430 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 PIDD1Q9HB75 910 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 KMT5AQ9NQR1 393 aa26.98■■□□□ 1.91
LIME1-206ENST00000487026 VWA3AA6NCI4 1184 aa26.97■■□□□ 1.91
LIME1-206ENST00000487026 CREMQ03060 361 aa26.97■■□□□ 1.91
LIME1-206ENST00000487026 DMP1Q13316 513 aaPredicted RBP26.97■■□□□ 1.91
LIME1-206ENST00000487026 PPP1R10Q96QC0 940 aaKnown RBP26.97■■□□□ 1.91
LIME1-206ENST00000487026 TARS2Q9BW92 718 aaKnown RBP26.97■■□□□ 1.91
LIME1-206ENST00000487026 CDT1Q9H211 546 aa26.97■■□□□ 1.91
LIME1-206ENST00000487026 TMEM134Q9H6X4 195 aa26.97■■□□□ 1.91
LIME1-206ENST00000487026 GOLGA2P5Q9HBQ8 144 aa26.97■■□□□ 1.91
LIME1-206ENST00000487026 CLUHO75153 1309 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 PHLPP2Q6ZVD8 1323 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 SLC16A4O15374 487 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 ADAM12O43184 909 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 CLCNKBP51801 687 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 PTPN5P54829 565 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 PSMD5Q16401 504 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 CYP26C1Q6V0L0 522 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 RSAD2Q8WXG1 361 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 PIK3R5Q8WYR1 880 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 DRC1Q96MC2 740 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 MYADMQ96S97 322 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 PRKD2Q9BZL6 878 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 PTPRHQ9HD43 1115 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 ARHGAP28Q9P2N2 729 aa26.96■■□□□ 1.91
LIME1-206ENST00000487026 MTCL1Q9Y4B5 1905 aaKnown RBP26.95■■□□□ 1.9
LIME1-206ENST00000487026 C1RP00736 705 aa26.95■■□□□ 1.9
LIME1-206ENST00000487026 TDGQ13569 410 aa26.95■■□□□ 1.9
LIME1-206ENST00000487026 ZNF568Q3ZCX4 644 aa26.95■■□□□ 1.9
LIME1-206ENST00000487026 APBB1IPQ7Z5R6 666 aaPredicted RBP26.95■■□□□ 1.9
LIME1-206ENST00000487026 PRRX2Q99811 253 aa26.95■■□□□ 1.9
LIME1-206ENST00000487026 MRPL4Q9BYD3 311 aaKnown RBP26.95■■□□□ 1.9
LIME1-206ENST00000487026 RHOBTB2Q9BYZ6 727 aa26.95■■□□□ 1.9
LIME1-206ENST00000487026 UPF2Q9HAU5 1272 aaKnown RBP26.95■■□□□ 1.9
LIME1-206ENST00000487026 ZDHHC7Q9NXF8 308 aa26.95■■□□□ 1.9
LIME1-206ENST00000487026 SMIM28A0A1B0GU29 152 aa26.94■■□□□ 1.9
LIME1-206ENST00000487026 ZMYND10O75800 440 aa26.94■■□□□ 1.9
LIME1-206ENST00000487026 B3GAT3O94766 335 aa26.94■■□□□ 1.9
LIME1-206ENST00000487026 GRM5P41594 1212 aa26.94■■□□□ 1.9
LIME1-206ENST00000487026 DCLRE1AQ6PJP8 1040 aa26.94■■□□□ 1.9
LIME1-206ENST00000487026 CD300LGQ6UXG3 332 aa26.94■■□□□ 1.9
LIME1-206ENST00000487026 STAMQ92783 540 aa26.94■■□□□ 1.9
LIME1-206ENST00000487026 TCHPQ9BT92 498 aa26.94■■□□□ 1.9
LIME1-206ENST00000487026 SMC3Q9UQE7 1217 aa26.94■■□□□ 1.9
LIME1-206ENST00000487026 RBM19Q9Y4C8 960 aaKnown RBP26.94■■□□□ 1.9
LIME1-206ENST00000487026 TRIP11Q15643 1979 aa26.93■■□□□ 1.9
LIME1-206ENST00000487026 I3L4J1 428 aa26.93■■□□□ 1.9
LIME1-206ENST00000487026 PAPLNO95428 1278 aa26.93■■□□□ 1.9
LIME1-206ENST00000487026 YARSP54577 528 aaKnown RBP26.93■■□□□ 1.9
LIME1-206ENST00000487026 SOX4Q06945 474 aaPredicted RBP26.93■■□□□ 1.9
LIME1-206ENST00000487026 ELAVL2Q12926 359 aaKnown RBP26.93■■□□□ 1.9
LIME1-206ENST00000487026 HYIQ5T013 277 aa26.93■■□□□ 1.9
LIME1-206ENST00000487026 ALKAL1Q6UXT8 129 aa26.93■■□□□ 1.9
LIME1-206ENST00000487026 TMEM105Q8N8V8 129 aa26.93■■□□□ 1.9
LIME1-206ENST00000487026 ZBTB45Q96K62 511 aaPredicted RBP26.93■■□□□ 1.9
LIME1-206ENST00000487026 CCDC94Q9BW85 323 aaPredicted RBP26.93■■□□□ 1.9
LIME1-206ENST00000487026 MFSD1Q9H3U5 465 aa26.93■■□□□ 1.9
LIME1-206ENST00000487026 FBXW11Q9UKB1 542 aa26.93■■□□□ 1.9
LIME1-206ENST00000487026 NPHP3-ACAD11A0A0J9YXS1 232 aa26.92■■□□□ 1.9
LIME1-206ENST00000487026 NARSO43776 548 aaKnown RBP26.92■■□□□ 1.9
LIME1-206ENST00000487026 HARSP12081 509 aaKnown RBP26.92■■□□□ 1.9
LIME1-206ENST00000487026 GUCY2CP25092 1073 aa26.92■■□□□ 1.9
LIME1-206ENST00000487026 UPP1Q16831 310 aa26.92■■□□□ 1.9
LIME1-206ENST00000487026 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.92■■□□□ 1.9
LIME1-206ENST00000487026 SYT2Q8N9I0 419 aaPredicted RBP26.92■■□□□ 1.9
LIME1-206ENST00000487026 C3orf58Q8NDZ4 430 aa26.92■■□□□ 1.9
LIME1-206ENST00000487026 ST13P5Q8NFI4 369 aaPredicted RBP26.92■■□□□ 1.9
LIME1-206ENST00000487026 CDK5RAP3Q96JB5 506 aa26.92■■□□□ 1.9
LIME1-206ENST00000487026 FAM86C1Q9NVL1 165 aa26.92■■□□□ 1.9
LIME1-206ENST00000487026 IGSF9Q9P2J2 1179 aa26.92■■□□□ 1.9
LIME1-206ENST00000487026 ABLIM1O14639 778 aa26.91■■□□□ 1.9
LIME1-206ENST00000487026 PLA2G4BP0C869 781 aa26.91■■□□□ 1.9
LIME1-206ENST00000487026 FGFR3P22607 806 aa26.91■■□□□ 1.9
LIME1-206ENST00000487026 OR1D2P34982 312 aa26.91■■□□□ 1.9
LIME1-206ENST00000487026 BRCC3P46736 316 aa26.91■■□□□ 1.9
LIME1-206ENST00000487026 CACNB1Q02641 598 aaPredicted RBP26.91■■□□□ 1.9
LIME1-206ENST00000487026 XKR4Q5GH76 650 aa26.91■■□□□ 1.9
LIME1-206ENST00000487026 LARP1BQ659C4 914 aaKnown RBP26.91■■□□□ 1.9
LIME1-206ENST00000487026 GET4Q7L5D6 327 aaPredicted RBP26.91■■□□□ 1.9
LIME1-206ENST00000487026 ZMAT2Q96NC0 199 aaKnown RBP26.91■■□□□ 1.9
LIME1-206ENST00000487026 NTPCRQ9BSD7 190 aaKnown RBP26.91■■□□□ 1.9
LIME1-206ENST00000487026 TIPINQ9BVW5 301 aa26.91■■□□□ 1.9
LIME1-206ENST00000487026 C17orf75Q9HAS0 396 aa26.91■■□□□ 1.9
LIME1-206ENST00000487026 TOPORSQ9NS56 1045 aaPredicted RBP26.91■■□□□ 1.9
LIME1-206ENST00000487026 EPS15L1Q9UBC2 864 aa26.91■■□□□ 1.9
LIME1-206ENST00000487026 VWA8A3KMH1 1905 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 TMEM189-UBE2V1I3L0A0 370 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 MCF2P10911 925 aa26.9■■□□□ 1.9
LIME1-206ENST00000487026 PLS3P13797 630 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms