RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RASAL2Q9UJF2 1139 aa19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 EXTL3O43909 919 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 PPFIA2O75334 1257 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 PTGIRP43119 386 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 DRG2P55039 364 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 DHX9Q08211 1270 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 MTERF2Q49AM1 385 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 RUFY4Q6ZNE9 571 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 PRELID2Q8N945 189 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 GLG1Q92896 1179 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 KCNN1Q92952 543 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 KLRG1Q96E93 195 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 TXLNGYQ9BZA5 131 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 ZDHHC18Q9NUE0 388 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 PCDHA3Q9Y5H8 950 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 MYPNQ86TC9 1320 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 LOC285556D6RIA3 1793 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 SPDYE16A6NNV3 312 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 SPOPO43791 374 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 LIG4P49917 911 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 CLDN10P78369 228 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 BIRC3Q13489 604 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 EMC2Q15006 297 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 CLEC16AQ2KHT3 1053 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 C18orf8Q96DM3 657 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 BTBD6Q96KE9 485 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 PI4K2AQ9BTU6 479 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 C1orf112Q9NSG2 853 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 HOXC10Q9NYD6 342 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 PCYOX1Q9UHG3 505 aa19.29■□□□□ 0.68
PDLIM7-207ENST00000486828 ZNFX1Q9P2E3 1918 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 MYO1FO00160 1098 aa19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 SORBS3O60504 671 aa19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 PYGMP11217 842 aa19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 KRT5P13647 590 aa19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 PSMD6Q15008 389 aa19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 NOL9Q5SY16 702 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 ZNF516Q92618 1163 aa19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 ELMO3Q96BJ8 720 aa19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 STYXL1Q9Y6J8 313 aa19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 LCTP09848 1927 aa19.28■□□□□ 0.68
PDLIM7-207ENST00000486828 KIAA0391O15091 583 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 ERLIN2O94905 339 aa19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 SCP2P22307 547 aa19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 ICAM3P32942 547 aa19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 CCT5P48643 541 aa19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 POLGP54098 1239 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 SP2Q02086 613 aa19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 ZDHHC14Q8IZN3 488 aa19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 ARFGAP2Q8N6H7 521 aa19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 PSPC1Q8WXF1 523 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 MAGOHBQ96A72 148 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 GPRC5DQ9NZD1 345 aa19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 CNOT8Q9UFF9 292 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 MAFBQ9Y5Q3 323 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-207ENST00000486828 ZEB2O60315 1214 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 ATG7O95352 703 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 ATP4AP20648 1035 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 STRN3Q13033 797 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 STXBP2Q15833 593 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 CYP1B1Q16678 543 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 AGBL2Q5U5Z8 902 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 DPY19L2Q6NUT2 758 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 CPNE8Q86YQ8 564 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 DNERQ8NFT8 737 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 TSPYL1Q9H0U9 437 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 ZNF302Q9NR11 478 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 AFG3L2Q9Y4W6 797 aa19.27■□□□□ 0.67
PDLIM7-207ENST00000486828 PODXLO00592 558 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 OATP04181 439 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 BRD2P25440 801 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 LSP1P33241 339 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 MDH1P40925 334 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 RWDD2BP57060 319 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 TTC27Q6P3X3 843 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 ZNF677Q86XU0 584 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 SLC13A5Q86YT5 568 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 RUNDC3BQ96NL0 473 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 FNBP1Q96RU3 617 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 CENPHQ9H3R5 247 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 MTUS1Q9ULD2 1270 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 SNX24Q9Y343 169 aa19.26■□□□□ 0.67
PDLIM7-207ENST00000486828 SSC5DA1L4H1 1573 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 PIGRP01833 764 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 UNGP13051 313 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 GBP1P32455 592 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 EIF3BP55884 814 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 GUCY1A3Q02108 690 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 SKIDA1Q1XH10 827 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 ZACNQ401N2 412 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 WDR44Q5JSH3 913 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 CCDC137Q6PK04 289 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 ZDHHC24Q6UX98 284 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 CYFIP1Q7L576 1253 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 CHST13Q8NET6 341 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 TRPM4Q8TD43 1214 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 FAM84AQ96KN4 292 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 PORCNQ9H237 461 aa19.25■□□□□ 0.67
PDLIM7-207ENST00000486828 DHX33Q9H6R0 707 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms