RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 FNIP2Q9P278 1114 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 POLIQ9UNA4 740 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 AKT3Q9Y243 479 aa9.42□□□□□ -0.9
APTX-228ENST00000486724 APC2O95996 2303 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 SPAARA0A1B0GVQ0 90 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 ERICH2A1L162 156 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 MEIS3P2A8K0S8 358 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 CDX4O14627 284 aaPredicted RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 IFIT3O14879 490 aaKnown RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 KHNYNO15037 678 aaKnown RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 ATXN7O15265 892 aaPredicted RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 DDHD2O94830 711 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 DARSP14868 501 aaKnown RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 RAB27AP51159 221 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 RCAN1P53805 252 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 ST3GAL1Q11201 340 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 GRM2Q14416 872 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 SEC23AQ15436 765 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 UAP1L1Q3KQV9 507 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 PLK5Q496M5 336 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 PABPC1LQ4VXU2 614 aaKnown RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 PPM1LQ5SGD2 360 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 FAM160B1Q5W0V3 765 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 TWF2Q6IBS0 349 aaKnown RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 TANGO2Q6ICL3 276 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 TMTC2Q8N394 836 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 ZNF843Q8N446 348 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 CHCHD4Q8N4Q1 142 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 ING5Q8WYH8 240 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 MSANTD3Q96H12 275 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 SCLT1Q96NL6 688 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 PIGSQ96S52 555 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 ZSCAN10Q96SZ4 725 aaPredicted RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 SDF4Q9BRK5 362 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 TRMT61BQ9BVS5 477 aaKnown RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 RBM12Q9NTZ6 932 aaKnown RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 C2orf42Q9NWW7 574 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 FBXW11Q9UKB1 542 aa9.41□□□□□ -0.9
APTX-228ENST00000486724 PRG3Q9Y2Y8 225 aaPredicted RBP9.41□□□□□ -0.9
APTX-228ENST00000486724 KLF18A0A0U1RQI7 1052 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 BCLAF3A2AJT9 711 aaKnown RBP9.4□□□□□ -0.9
APTX-228ENST00000486724 CCDC66A2RUB6 948 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 GOLGA8BA8MQT2 603 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 BACH1O14867 736 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 CCL16O15467 120 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 PFKFB2O60825 505 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 EFEMP2O95967 443 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 NTRK1P04629 796 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 C8AP07357 584 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 POU2F2P09086 479 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 FGFR4P22455 802 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 CCNE1P24864 410 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 HOXC13P31276 330 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 CLCN3P51790 818 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 GABPB1Q06547 395 aaPredicted RBP9.4□□□□□ -0.9
APTX-228ENST00000486724 ZNF423Q2M1K9 1284 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 DGKKQ5KSL6 1271 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 APOA5Q6Q788 366 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 USP17L6PQ6QN14 398 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 RAB44Q7Z6P3 723 aaPredicted RBP9.4□□□□□ -0.9
APTX-228ENST00000486724 GAS2L3Q86XJ1 694 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 MAP4K3Q8IVH8 894 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 GPR65Q8IYL9 337 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 PDCL2Q8N4E4 241 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 ENAHQ8N8S7 591 aaPredicted RBP9.4□□□□□ -0.9
APTX-228ENST00000486724 LSM14AQ8ND56 463 aaKnown RBP9.4□□□□□ -0.9
APTX-228ENST00000486724 PGBD4Q96DM1 585 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 MCRS1Q96EZ8 462 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
APTX-228ENST00000486724 ZNF334Q9HCZ1 680 aaPredicted RBP9.4□□□□□ -0.9
APTX-228ENST00000486724 JADE2Q9NQC1 790 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 CHST7Q9NS84 486 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 FAM105AQ9NUU6 356 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 KANSL3Q9P2N6 904 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 MRPS23Q9Y3D9 190 aaKnown RBP9.4□□□□□ -0.9
APTX-228ENST00000486724 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.4□□□□□ -0.9
APTX-228ENST00000486724 UBIAD1Q9Y5Z9 338 aa9.4□□□□□ -0.9
APTX-228ENST00000486724 TEP1Q99973 2627 aaKnown RBP9.39□□□□□ -0.91
APTX-228ENST00000486724 NFASCO94856 1347 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 PDCD11Q14690 1871 aaKnown RBP9.39□□□□□ -0.91
APTX-228ENST00000486724 IGKV6D-21A0A0A0MT36 114 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 PNMA6FA0A0J9YX94 578 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 CCDC69A6NI79 296 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 PIK3CDO00329 1044 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 RHOBTB1O94844 696 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 ATG7O95352 703 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 FCARP24071 287 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 TMOD1P28289 359 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 PDIA3P30101 505 aaKnown RBP9.39□□□□□ -0.91
APTX-228ENST00000486724 GDI1P31150 447 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 PXNP49023 591 aaPredicted RBP9.39□□□□□ -0.91
APTX-228ENST00000486724 MLLT6P55198 1093 aaPredicted RBP9.39□□□□□ -0.91
APTX-228ENST00000486724 SCRN1Q12765 414 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 IFIT1BQ5T764 474 aaKnown RBP9.39□□□□□ -0.91
APTX-228ENST00000486724 PDXDC2PQ6P474 469 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 NFXL1Q6ZNB6 911 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 CCDC83Q8IWF9 413 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 TMEFF1Q8IYR6 380 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 MDM1Q8TC05 714 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms