RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 FAM83AQ86UY5 434 aa4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 NGDNQ8NEJ9 315 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 MYRIPQ8NFW9 859 aa4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 FBXO41Q8TF61 875 aa4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 POLR3CQ9BUI4 534 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 MTG2Q9H4K7 406 aa4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 INTS7Q9NVH2 962 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 TMEM51Q9NW97 253 aa4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 CLIC5Q9NZA1 410 aa4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 TMCC3Q9ULS5 477 aa4.89□□□□□ -1.63
R3HDM1-217ENST00000486532 DYTNA2CJ06 578 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 CBX4O00257 560 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 IPO8O15397 1037 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 B3GALT2O43825 422 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 ORC4O43929 436 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 GAS7O60861 476 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 RFPL3O75679 317 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 HNRNPLP14866 589 aaKnown RBP eCLIP4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 LAG3P18627 525 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 PSMA3P25788 255 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 ADRA1BP35368 520 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 DDIT3P35638 169 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 PIK3CAP42336 1068 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 NAP1L1P55209 391 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 PDE1CQ14123 709 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 TRIM29Q14134 588 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 MORC3Q14149 939 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 SEPT2Q15019 361 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 GRAMD1BQ3KR37 738 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 CCDC178Q5BJE1 867 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 HYIQ5T013 277 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 C1QTNF12Q5T7M4 302 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 ARL6IP6Q8N6S5 226 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 MNS1Q8NEH6 495 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 PGBD4Q96DM1 585 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 SLC39A13Q96H72 371 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 CCDC34Q96HJ3 373 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 DCLRE1CQ96SD1 692 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 CPPED1Q9BRF8 314 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 ORAI3Q9BRQ5 295 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 CYP4F11Q9HBI6 524 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 TOMM22Q9NS69 142 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 GTF2A1LQ9UNN4 478 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 SORCS3Q9UPU3 1222 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 PPP2R3BQ9Y5P8 575 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 RAD54L2Q9Y4B4 1467 aa4.88□□□□□ -1.63
R3HDM1-217ENST00000486532 TRIM64CA6NLI5 447 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 HOXA3O43365 443 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 FIBPO43427 364 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 LMNAP02545 664 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 JMJD7P0C870 316 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 TGFB3P10600 412 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 SLC9A1P19634 815 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 FBLP22087 321 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 PTX3P26022 381 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 GPR15P49685 360 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 EPHB1P54762 984 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 NRG3P56975 720 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 LRRC32Q14392 662 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 KIF22Q14807 665 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 MBNL2Q5VZF2 373 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 CDCA2Q69YH5 1023 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 Q6ZPA2 131 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 BRSK2Q8IWQ3 736 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 LILRB2Q8N423 598 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 CDYL2Q8N8U2 506 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 MIGA1Q8NAN2 632 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 PPHLN1Q8NEY8 458 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 CPT1CQ8TCG5 803 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 SYAP1Q96A49 352 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 PAWRQ96IZ0 340 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 CDK5RAP3Q96JB5 506 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 MPP4Q96JB8 637 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 ELF4Q99607 663 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 MYL10Q9BUA6 226 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 EVLQ9UI08 416 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 EIF2B4Q9UI10 523 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 HDAC9Q9UKV0 1011 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 MAFFQ9ULX9 164 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 PCDHB6Q9Y5E3 794 aa4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 ZCCHC6Q5VYS8 1495 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-217ENST00000486532 PRRT4C9JH25 899 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 DIRC3C9JPN6 131 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 CHL1O00533 1208 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 COQ9O75208 318 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 DNAJC8O75937 253 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 ALDH1A2O94788 518 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 SCAF4O95104 1147 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 NUDT3O95989 172 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 CCDC175P0C221 793 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 GAAP10253 952 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 AVPR1BP47901 424 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 PPM1FP49593 454 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 ZNF132P52740 706 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 GEMIN4P57678 1058 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 OCRLQ01968 901 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 IFT88Q13099 833 aa4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 TTC31Q49AM3 519 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 UTP14CQ5TAP6 766 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-217ENST00000486532 STRIP1Q5VSL9 837 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms