RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 LAMTOR4Q0VGL1 99 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 GPS2Q13227 327 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 TAF3Q5VWG9 929 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 TDRD10Q5VZ19 366 aaKnown RBP21.9■■□□□ 1.1
HPS3-206ENST00000486530 METTL13Q8N6R0 699 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 PCDHB18PQ96TA0 734 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 CGRRF1Q99675 332 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 C2orf40Q9H1Z8 148 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 ZMYND10O75800 440 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 HLA-DRAP01903 254 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 WNT7BP56706 349 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 HUNKP57058 714 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 TNNC1P63316 161 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 ZNF792Q3KQV3 632 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 COPS5Q92905 334 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 PI4K2AQ9BTU6 479 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 DMGDHQ9UI17 866 aaKnown RBP21.9■■□□□ 1.1
HPS3-206ENST00000486530 TMEM59LQ9UK28 342 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 ZSWIM8A7E2V4 1837 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 PGRMC1O00264 195 aaKnown RBP21.89■■□□□ 1.09
HPS3-206ENST00000486530 CLDN3O15551 220 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 CEP104O60308 925 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 HBP1O60381 514 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 MSCO60682 206 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 MMEP08473 750 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 TNFRSF8P28908 595 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 MKRN4PQ13434 485 aaPredicted RBP21.89■■□□□ 1.09
HPS3-206ENST00000486530 BIRC3Q13489 604 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 LMBRD2Q68DH5 695 aaPredicted RBP21.89■■□□□ 1.09
HPS3-206ENST00000486530 HDAC7Q8WUI4 952 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 ACBD3Q9H3P7 528 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 VIPAS39Q9H9C1 493 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 TRPC6Q9Y210 931 aa21.89■■□□□ 1.09
HPS3-206ENST00000486530 TOM1L1O75674 476 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 PTPROQ16827 1216 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 ZBTB41Q5SVQ8 909 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 C11orf63Q6NUN7 778 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 RASGEF1CQ8N431 466 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 DHX38Q92620 1227 aaKnown RBP21.88■■□□□ 1.09
HPS3-206ENST00000486530 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.88■■□□□ 1.09
HPS3-206ENST00000486530 PDGFCQ9NRA1 345 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 CTTNBP2NLQ9P2B4 639 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 COG5Q9UP83 839 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 PTPRJQ12913 1337 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 PRKCBP05771 671 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 KRT5P13647 590 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 MAPK6Q16659 721 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 BRSK2Q8IWQ3 736 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 ABRAQ8N0Z2 381 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 LRRC71Q8N4P6 559 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 RNF149Q8NC42 400 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 DDX1Q92499 740 aaKnown RBP21.88■■□□□ 1.09
HPS3-206ENST00000486530 PARK7Q99497 189 aaKnown RBP21.88■■□□□ 1.09
HPS3-206ENST00000486530 GPBP1L1Q9HC44 474 aaPredicted RBP21.88■■□□□ 1.09
HPS3-206ENST00000486530 VTA1Q9NP79 307 aa21.88■■□□□ 1.09
HPS3-206ENST00000486530 CNTNAP2Q9UHC6 1331 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 STRNO43815 780 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 MTA2O94776 668 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 VNN1O95497 513 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 ADORA2AP29274 412 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 AP3M2P53677 418 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 GRM1Q13255 1194 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 TFDP1Q14186 410 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 AENQ8WTP8 325 aaKnown RBP21.87■■□□□ 1.09
HPS3-206ENST00000486530 UBE2Q2Q8WVN8 375 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 ACP6Q9NPH0 428 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 ST7Q9NRC1 585 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 ERAP1Q9NZ08 941 aa21.87■■□□□ 1.09
HPS3-206ENST00000486530 NOC2LQ9Y3T9 749 aaKnown RBP21.87■■□□□ 1.09
HPS3-206ENST00000486530 A0A0U1RQG5 324 aaPredicted RBP21.86■■□□□ 1.09
HPS3-206ENST00000486530 SRGAP2CP0DJJ0 459 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 MYBL2P10244 700 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 OAS2P29728 719 aaKnown RBP21.86■■□□□ 1.09
HPS3-206ENST00000486530 TNNT3P45378 269 aaPredicted RBP21.86■■□□□ 1.09
HPS3-206ENST00000486530 SLC7A5Q01650 507 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 ARHGAP1Q07960 439 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 LAMC2Q13753 1193 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 ZNF677Q86XU0 584 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 FAM84AQ96KN4 292 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 KRT12Q99456 494 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 ACO2Q99798 780 aaKnown RBP21.86■■□□□ 1.09
HPS3-206ENST00000486530 EVPLQ92817 2033 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 HARSP12081 509 aaKnown RBP21.86■■□□□ 1.09
HPS3-206ENST00000486530 BPIFB4P59827 614 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 RNASE9P60153 205 aaKnown RBP21.86■■□□□ 1.09
HPS3-206ENST00000486530 ZNF467Q7Z7K2 595 aaPredicted RBP21.86■■□□□ 1.09
HPS3-206ENST00000486530 RASAL3Q86YV0 1011 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 RHPN2Q8IUC4 686 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 GTF3C4Q9UKN8 822 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 TTC7AQ9ULT0 858 aaPredicted RBP21.86■■□□□ 1.09
HPS3-206ENST00000486530 IVNS1ABPQ9Y6Y0 642 aa21.86■■□□□ 1.09
HPS3-206ENST00000486530 CCDC188H7C350 402 aa21.85■■□□□ 1.09
HPS3-206ENST00000486530 DDX3YO15523 660 aaKnown RBP21.85■■□□□ 1.09
HPS3-206ENST00000486530 FAM189A1O60320 539 aa21.85■■□□□ 1.09
HPS3-206ENST00000486530 MCL1Q07820 350 aa21.85■■□□□ 1.09
HPS3-206ENST00000486530 TMEM63BQ5T3F8 832 aa21.85■■□□□ 1.09
HPS3-206ENST00000486530 TAPT1Q6NXT6 567 aa21.85■■□□□ 1.09
HPS3-206ENST00000486530 IFT20Q8IY31 132 aa21.85■■□□□ 1.09
HPS3-206ENST00000486530 GSPT2Q8IYD1 628 aaKnown RBP21.85■■□□□ 1.09
HPS3-206ENST00000486530 ELMO3Q96BJ8 720 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms