RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 EIF4BP23588 611 aaKnown RBP6.18□□□□□ -1.42
COPS3-208ENST00000486032 PTGIRP43119 386 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 CASP5P51878 434 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 NCKAP1LP55160 1127 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 STRN3Q13033 797 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 LPIN1Q14693 890 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 GPNMBQ14956 572 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 MAPK6Q16659 721 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 FBXO47Q5MNV8 452 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 FAM109BQ6ICB4 259 aaPredicted RBP6.18□□□□□ -1.42
COPS3-208ENST00000486032 KLHL10Q6JEL2 608 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 C16orf59Q7L2K0 433 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 HAUS6Q7Z4H7 955 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 SRGAP1Q7Z6B7 1085 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 ZBTB33Q86T24 672 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 ZNF410Q86VK4 478 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 FAM228AQ86W67 206 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 SMYD4Q8IYR2 804 aaPredicted RBP6.18□□□□□ -1.42
COPS3-208ENST00000486032 SYCP3Q8IZU3 236 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 TMEM199Q8N511 208 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 GOLGA6L1Q8N7Z2 621 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 SYAP1Q96A49 352 aaPredicted RBP6.18□□□□□ -1.42
COPS3-208ENST00000486032 GAS2L1Q99501 681 aaPredicted RBP6.18□□□□□ -1.42
COPS3-208ENST00000486032 TCHPQ9BT92 498 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 APOL6Q9BWW8 343 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 C2orf40Q9H1Z8 148 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 IKZF4Q9H2S9 585 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 MINDY3Q9H8M7 445 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 AGO3Q9H9G7 860 aaKnown RBP6.18□□□□□ -1.42
COPS3-208ENST00000486032 RMND1Q9NWS8 449 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 MAN1B1Q9UKM7 699 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 ST3GAL5Q9UNP4 418 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 PIN4Q9Y237 131 aaKnown RBP6.18□□□□□ -1.42
COPS3-208ENST00000486032 NR2E3Q9Y5X4 410 aa6.18□□□□□ -1.42
COPS3-208ENST00000486032 GPR182O15218 404 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 CLIC2O15247 247 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 CAND2O75155 1236 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 RPLP2P05387 115 aaKnown RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 MYL1P05976 194 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 ADH1AP07327 375 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 MAPTP10636 758 aaKnown RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 ZSCAN20P17040 1043 aaPredicted RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 SFPQP23246 707 aaKnown RBP eCLIP6.17□□□□□ -1.42
COPS3-208ENST00000486032 LIG4P49917 911 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 RNF144AP50876 292 aaPredicted RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 ZNF131P52739 623 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 STX17P56962 302 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 PTENP60484 403 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 CDC42EP1Q00587 391 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 FPGSQ05932 587 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 MBTD1Q05BQ5 628 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 NCBP1Q09161 790 aaKnown RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 KCNA1Q09470 495 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 STK4Q13043 487 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 PRPF4BQ13523 1007 aaKnown RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 MBTPS1Q14703 1052 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 KLHL40Q2TBA0 621 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 SKOR2Q2VWA4 1001 aaPredicted RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 HABP4Q5JVS0 413 aaKnown RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 FAM26DQ5JW98 314 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 PRSS36Q5K4E3 855 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 MFSD5Q6N075 450 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 SASS6Q6UVJ0 657 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 TSHZ1Q6ZSZ6 1077 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 STXBP4Q6ZWJ1 553 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 OTOP2Q7RTS6 562 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 ZNF720Q7Z2F6 126 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 RPAINQ86UA6 219 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 RNF169Q8NCN4 708 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 TMEM161BQ8NDZ6 487 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 DBF4BQ8NFT6 615 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 SEPT8Q92599 483 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 GSDMAQ96QA5 445 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 ACCSQ96QU6 501 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 TARS2Q9BW92 718 aaKnown RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 IFIH1Q9BYX4 1025 aaKnown RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 PCIF1Q9H4Z3 704 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 C17orf75Q9HAS0 396 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 IFT122Q9HBG6 1241 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 ERVK-5Q9HDB9 667 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 PRMT7Q9NVM4 692 aaPredicted RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 ARHGAP28Q9P2N2 729 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 ANKFY1Q9P2R3 1169 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 SEL1LQ9UBV2 794 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 KCNG1Q9UIX4 513 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 CDV3Q9UKY7 258 aaKnown RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 PADI3Q9ULW8 664 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 TBX20Q9UMR3 447 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 LAMA2P24043 3122 aaKnown RBP6.17□□□□□ -1.42
COPS3-208ENST00000486032 PHLPP2Q6ZVD8 1323 aa6.17□□□□□ -1.42
COPS3-208ENST00000486032 TET1Q8NFU7 2136 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 GBF1Q92538 1859 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 SYCE3A1L190 88 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 FRMD3A2A2Y4 597 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 TISP43B9A030 160 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 H0YCG3 227 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 HYAL3O43820 417 aaPredicted RBP6.16□□□□□ -1.42
COPS3-208ENST00000486032 MGEA5O60502 916 aa6.16□□□□□ -1.42
COPS3-208ENST00000486032 TSPAN1O60635 241 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms