RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ULK1O75385 1050 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 SPATA31D3P0C874 917 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 HKR1P10072 659 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 MPLP40238 635 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 AVPR1BP47901 424 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 GYS2P54840 703 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 C21orf58P58505 322 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 PPP3CAQ08209 521 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 ADRM1Q16186 407 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 ATXN7L2Q5T6C5 722 aaPredicted RBP5.65□□□□□ -1.5
GCFC2-209ENST00000486016 SPATA31D4Q6ZUB0 917 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 LMBR1Q8WVP7 490 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 USP7Q93009 1102 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 FAM30AQ9NZY2 134 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 PTGFRNQ9P2B2 879 aa5.65□□□□□ -1.5
GCFC2-209ENST00000486016 ESRRBO95718 433 aa5.64□□□□□ -1.51
GCFC2-209ENST00000486016 HLA-DOAP06340 250 aa5.64□□□□□ -1.51
GCFC2-209ENST00000486016 ADSLP30566 484 aaPredicted RBP5.64□□□□□ -1.51
GCFC2-209ENST00000486016 SREBF1P36956 1147 aa5.64□□□□□ -1.51
GCFC2-209ENST00000486016 BLOC1S1P78537 153 aa5.64□□□□□ -1.51
GCFC2-209ENST00000486016 MRPS9P82933 396 aaKnown RBP5.64□□□□□ -1.51
GCFC2-209ENST00000486016 B3GNTL1Q67FW5 361 aaPredicted RBP5.64□□□□□ -1.51
GCFC2-209ENST00000486016 DDX46Q7L014 1031 aaKnown RBP5.64□□□□□ -1.51
GCFC2-209ENST00000486016 OR56A1Q8NGH5 318 aa5.64□□□□□ -1.51
GCFC2-209ENST00000486016 VTA1Q9NP79 307 aa5.64□□□□□ -1.51
GCFC2-209ENST00000486016 MAST3O60307 1309 aa5.64□□□□□ -1.51
GCFC2-209ENST00000486016 SALL3Q9BXA9 1300 aa5.64□□□□□ -1.51
GCFC2-209ENST00000486016 CCDC78A2IDD5 438 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 AKR1B10O60218 316 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 SNRPA1P09661 255 aaKnown RBP5.63□□□□□ -1.51
GCFC2-209ENST00000486016 GUCY1A2P33402 732 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 PTPN7P35236 360 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 CDK17Q00537 523 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 SP140Q13342 867 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 MUM1Q2TAK8 710 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 STRIP1Q5VSL9 837 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 ZKSCAN2Q63HK3 967 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 ARMC6Q6NXE6 501 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 HDGFL2Q7Z4V5 671 aaPredicted RBP5.63□□□□□ -1.51
GCFC2-209ENST00000486016 GPR149Q86SP6 731 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 TMEM132CQ8N3T6 1108 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 SIMC1Q8NDZ2 872 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 TTC1Q99614 292 aa5.63□□□□□ -1.51
GCFC2-209ENST00000486016 MASP2O00187 686 aa5.62□□□□□ -1.51
GCFC2-209ENST00000486016 SYCE2Q6PIF2 218 aa5.62□□□□□ -1.51
GCFC2-209ENST00000486016 BHLHA9Q7RTU4 235 aa5.62□□□□□ -1.51
GCFC2-209ENST00000486016 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
GCFC2-209ENST00000486016 TMEM74BQ9NUR3 256 aa5.62□□□□□ -1.51
GCFC2-209ENST00000486016 APOBEC2Q9Y235 224 aaKnown RBP5.62□□□□□ -1.51
GCFC2-209ENST00000486016 ATP11BQ9Y2G3 1177 aa5.62□□□□□ -1.51
GCFC2-209ENST00000486016 CDKL5O76039 1030 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 PLA2G5P39877 138 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 PTH2RP49190 550 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 OCA2Q04671 838 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 STRN3Q13033 797 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 ZNF362Q5T0B9 420 aaPredicted RBP5.61□□□□□ -1.51
GCFC2-209ENST00000486016 TSHZ3Q63HK5 1081 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 AFMIDQ63HM1 303 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 FBXO42Q6P3S6 717 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 MED25Q71SY5 747 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 UBR7Q8N806 425 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 FBXO18Q8NFZ0 1043 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 AUTS2Q8WXX7 1259 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 FATE1Q969F0 183 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 CAVIN3Q969G5 261 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 MRI1Q9BV20 369 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 GREM2Q9H772 168 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 IFT122Q9HBG6 1241 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 SIK3Q9Y2K2 1263 aa5.61□□□□□ -1.51
GCFC2-209ENST00000486016 A0A1B0GTW7 788 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 PRSS23O95084 383 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 FOSP01100 380 aaPredicted RBP5.6□□□□□ -1.51
GCFC2-209ENST00000486016 ERBB2P04626 1255 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 GCSHP23434 173 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 ECHS1P30084 290 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 RRP12Q5JTH9 1297 aaKnown RBP5.6□□□□□ -1.51
GCFC2-209ENST00000486016 OTUD7BQ6GQQ9 843 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 RD3Q7Z3Z2 195 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 AFAP1L2Q8N4X5 818 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 TGFBRAP1Q8WUH2 860 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 FUBP3Q96I24 572 aaKnown RBP eCLIP5.6□□□□□ -1.51
GCFC2-209ENST00000486016 QRSL1Q9H0R6 528 aaKnown RBP5.6□□□□□ -1.51
GCFC2-209ENST00000486016 DMRT3Q9NQL9 472 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 RBM12Q9NTZ6 932 aaKnown RBP5.6□□□□□ -1.51
GCFC2-209ENST00000486016 SLC23A1Q9UHI7 598 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 INSL6Q9Y581 213 aa5.6□□□□□ -1.51
GCFC2-209ENST00000486016 EYA4O95677 639 aa5.59□□□□□ -1.51
GCFC2-209ENST00000486016 ITGAMP11215 1152 aa5.59□□□□□ -1.51
GCFC2-209ENST00000486016 ZNF37AP17032 561 aaPredicted RBP5.59□□□□□ -1.51
GCFC2-209ENST00000486016 CXCR5P32302 372 aa5.59□□□□□ -1.51
GCFC2-209ENST00000486016 MCAMP43121 646 aa5.59□□□□□ -1.51
GCFC2-209ENST00000486016 SLC6A9P48067 706 aa5.59□□□□□ -1.51
GCFC2-209ENST00000486016 CCT2P78371 535 aaKnown RBP5.59□□□□□ -1.51
GCFC2-209ENST00000486016 MPP3Q13368 585 aa5.59□□□□□ -1.51
GCFC2-209ENST00000486016 UBXN2BQ14CS0 331 aa5.59□□□□□ -1.51
GCFC2-209ENST00000486016 ANO4Q32M45 955 aa5.59□□□□□ -1.51
GCFC2-209ENST00000486016 GJC2Q5T442 439 aaPredicted RBP5.59□□□□□ -1.51
GCFC2-209ENST00000486016 NOP9Q86U38 636 aaKnown RBP5.59□□□□□ -1.51
GCFC2-209ENST00000486016 DRC7Q8IY82 874 aa5.59□□□□□ -1.51
GCFC2-209ENST00000486016 PQLC1Q8N2U9 271 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms