RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 SPPL3Q8TCT6 385 aa16.76■□□□□ 0.27
HDHD3-203ENST00000485934 MICAL1Q8TDZ2 1067 aa16.76■□□□□ 0.27
HDHD3-203ENST00000485934 GDPD5Q8WTR4 605 aa16.76■□□□□ 0.27
HDHD3-203ENST00000485934 SCFD1Q8WVM8 642 aa16.76■□□□□ 0.27
HDHD3-203ENST00000485934 IGSF21Q96ID5 467 aa16.76■□□□□ 0.27
HDHD3-203ENST00000485934 SNX27Q96L92 541 aa16.76■□□□□ 0.27
HDHD3-203ENST00000485934 ASB7Q9H672 318 aa16.76■□□□□ 0.27
HDHD3-203ENST00000485934 NGRNQ9NPE2 291 aaKnown RBP16.76■□□□□ 0.27
HDHD3-203ENST00000485934 CNTN3Q9P232 1028 aa16.76■□□□□ 0.27
HDHD3-203ENST00000485934 SSX2IPQ9Y2D8 614 aa16.76■□□□□ 0.27
HDHD3-203ENST00000485934 RFXAPO00287 272 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 NRP1O14786 923 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 GADD45BO75293 160 aaPredicted RBP16.75■□□□□ 0.27
HDHD3-203ENST00000485934 IL18RAPO95256 599 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 RPL9P32969 192 aaKnown RBP16.75■□□□□ 0.27
HDHD3-203ENST00000485934 PPP1R2P41236 205 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 AFF1P51825 1210 aaKnown RBP16.75■□□□□ 0.27
HDHD3-203ENST00000485934 KCNA1Q09470 495 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 STK4Q13043 487 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 SLC10A6Q3KNW5 377 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 SLC39A4Q6P5W5 647 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 DDX53Q86TM3 631 aaKnown RBP16.75■□□□□ 0.27
HDHD3-203ENST00000485934 NT5DC4Q86YG4 428 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 CEP120Q8N960 986 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 POF1BQ8WVV4 589 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 HPS3Q969F9 1004 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 ALG13Q9NP73 1137 aaKnown RBP16.75■□□□□ 0.27
HDHD3-203ENST00000485934 TLR9Q9NR96 1032 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 MIOSQ9NXC5 875 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 CPSF3Q9UKF6 684 aaKnown RBP16.75■□□□□ 0.27
HDHD3-203ENST00000485934 DERAQ9Y315 318 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 MTCH2Q9Y6C9 303 aa16.75■□□□□ 0.27
HDHD3-203ENST00000485934 TTC26A0AVF1 554 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 EPOPA6NHQ4 379 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 PTGESO14684 152 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 GRM6O15303 877 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 TRAPPC3O43617 180 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 EXTL3O43909 919 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 TADA2AO75478 443 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 CYP3A5P20815 502 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 PAX3P23760 479 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 ADSSP30520 456 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 SLC11A1P49279 550 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 ELAVL2Q12926 359 aaKnown RBP16.74■□□□□ 0.27
HDHD3-203ENST00000485934 PNOCQ13519 176 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 STIM1Q13586 685 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 ADGRE1Q14246 886 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 MYBPC2Q14324 1141 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 SURF1Q15526 300 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 DCLRE1AQ6PJP8 1040 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 SPRED2Q7Z698 418 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 GPD1LQ8N335 351 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 PPP1R10Q96QC0 940 aaKnown RBP16.74■□□□□ 0.27
HDHD3-203ENST00000485934 DNAJB4Q9UDY4 337 aa16.74■□□□□ 0.27
HDHD3-203ENST00000485934 UBQLN1Q9UMX0 589 aaKnown RBP16.74■□□□□ 0.27
HDHD3-203ENST00000485934 ZNF233A6NK53 670 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 PDXKO00764 312 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 CALUO43852 315 aaPredicted RBP16.73■□□□□ 0.27
HDHD3-203ENST00000485934 ADRB2P07550 413 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 CXCL8P10145 99 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 ACOT2P49753 483 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 TMC7Q7Z402 723 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 NELFCDQ8IXH7 590 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 C12orf56Q8IXR9 622 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 GUF1Q8N442 669 aaKnown RBP16.73■□□□□ 0.27
HDHD3-203ENST00000485934 SPATA20Q8TB22 786 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 CACTINQ8WUQ7 758 aaKnown RBP16.73■□□□□ 0.27
HDHD3-203ENST00000485934 TMEM174Q8WUU8 243 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 FAM212AQ96EL1 285 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 FAM213AQ9BRX8 229 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 FGFBP2Q9BYJ0 223 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 HAPLN2Q9GZV7 340 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 NSUN3Q9H649 340 aaKnown RBP16.73■□□□□ 0.27
HDHD3-203ENST00000485934 AGPAT3Q9NRZ7 376 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 HCSTQ9UBK5 93 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 PCDHA5Q9Y5H7 936 aa16.73■□□□□ 0.27
HDHD3-203ENST00000485934 NT5C1B-RDH14C9J2C7 533 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 FAM189A1O60320 539 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 RPL13P26373 211 aaKnown RBP16.72■□□□□ 0.27
HDHD3-203ENST00000485934 ENOX2Q16206 610 aaKnown RBP16.72■□□□□ 0.27
HDHD3-203ENST00000485934 SEZ6Q53EL9 994 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 ZNF658Q5TYW1 1059 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-203ENST00000485934 KIAA1841Q6NSI8 718 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 USP37Q86T82 979 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 GPR65Q8IYL9 337 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 XXYLT1Q8NBI6 393 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 KIAA0895Q8NCT3 520 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 GLIS3Q8NEA6 775 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 BEST2Q8NFU1 509 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 MAFAQ8NHW3 353 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-203ENST00000485934 KIF12Q96FN5 646 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 ENTPD7Q9NQZ7 604 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 HSPBP1Q9NZL4 362 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 ADAM28Q9UKQ2 775 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 PRG3Q9Y2Y8 225 aaPredicted RBP16.72■□□□□ 0.27
HDHD3-203ENST00000485934 C2CD2Q9Y426 696 aa16.72■□□□□ 0.27
HDHD3-203ENST00000485934 LAMA2P24043 3122 aaKnown RBP16.72■□□□□ 0.27
HDHD3-203ENST00000485934 SF3B1O75533 1304 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDHD3-203ENST00000485934 PTPRSQ13332 1948 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms