RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 CBWD3Q5JTY5 395 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 CBWD5Q5RIA9 395 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 SLC27A1Q6PCB7 646 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 C15orf39Q6ZRI6 1047 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 LRRC8DQ7L1W4 858 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 LRRC8AQ8IWT6 810 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 CCDC155Q8N6L0 562 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 ZNF516Q92618 1163 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 CCDC51Q96ER9 411 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 GDF15Q99988 308 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 TCHPQ9BT92 498 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 EIF2AQ9BY44 585 aaKnown RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 RBAKQ9NYW8 714 aaPredicted RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 ZMYND8Q9ULU4 1186 aaPredicted RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 PADI3Q9ULW8 664 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 PIN4Q9Y237 131 aaKnown RBP12.29□□□□□ -0.44
SND1-212ENST00000485871 PTPRJQ12913 1337 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 LAMA3Q16787 3333 aa12.29□□□□□ -0.44
SND1-212ENST00000485871 DNAH12Q6ZR08 3092 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 GTPBP10A4D1E9 387 aaKnown RBP12.28□□□□□ -0.44
SND1-212ENST00000485871 GPR182O15218 404 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 CCP110O43303 1012 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 NPTXRO95502 500 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 CLTAP09496 248 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 KRT13P13646 458 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 CD52P31358 61 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 MATR3P43243 847 aaKnown RBP eCLIP12.28□□□□□ -0.44
SND1-212ENST00000485871 FMO5P49326 533 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 UBXN1Q04323 297 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 BFSP2Q13515 415 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 HSP90AA2PQ14568 343 aaPredicted RBP12.28□□□□□ -0.44
SND1-212ENST00000485871 ENOX2Q16206 610 aaKnown RBP12.28□□□□□ -0.44
SND1-212ENST00000485871 SLC10A6Q3KNW5 377 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 LRIT3Q3SXY7 679 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 NECAB2Q7Z6G3 386 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 THNSL1Q8IYQ7 743 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 C7orf61Q8IZ16 206 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 SMG8Q8ND04 991 aaKnown RBP12.28□□□□□ -0.44
SND1-212ENST00000485871 ADPGKQ9BRR6 497 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 TRAIPQ9BWF2 469 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 WNT8AQ9H1J5 351 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 PDE11AQ9HCR9 933 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 CHST12Q9NRB3 414 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 KCND1Q9NSA2 647 aa12.28□□□□□ -0.44
SND1-212ENST00000485871 TDRD15B5MCY1 1934 aaKnown RBP12.27□□□□□ -0.44
SND1-212ENST00000485871 TTC26A0AVF1 554 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 NBNO60934 754 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 TUBB4AP04350 444 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 STAG3L1P0CL83 205 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 CXCL8P10145 99 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 KLK7P49862 253 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 KYAT1Q16773 422 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 TMEM132AQ24JP5 1023 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 DNTTIP2Q5QJE6 756 aaKnown RBP12.27□□□□□ -0.45
SND1-212ENST00000485871 FKBP15Q5T1M5 1219 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 TCERG1LQ5VWI1 586 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 LMO3Q8TAP4 145 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 LINC01599Q8WXQ3 324 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 VWCEQ96DN2 955 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 FAM84AQ96KN4 292 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 ZNF830Q96NB3 372 aaPredicted RBP12.27□□□□□ -0.45
SND1-212ENST00000485871 POP1Q99575 1024 aaKnown RBP12.27□□□□□ -0.45
SND1-212ENST00000485871 CGRRF1Q99675 332 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 TTYH3Q9C0H2 523 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 TMEM117Q9H0C3 514 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 NXF3Q9H4D5 531 aaKnown RBP12.27□□□□□ -0.45
SND1-212ENST00000485871 TOPORSQ9NS56 1045 aaPredicted RBP12.27□□□□□ -0.45
SND1-212ENST00000485871 COQ4Q9Y3A0 265 aa12.27□□□□□ -0.45
SND1-212ENST00000485871 DCDC2CA8MYV0 355 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 KIF2AO00139 706 aaPredicted RBP12.26□□□□□ -0.45
SND1-212ENST00000485871 P4HA2O15460 535 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 C4BPAP04003 597 aaKnown RBP12.26□□□□□ -0.45
SND1-212ENST00000485871 GTF2H1P32780 548 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 GCLMP48507 274 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 OSTNP61366 133 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
SND1-212ENST00000485871 NFX1Q12986 1120 aaKnown RBP12.26□□□□□ -0.45
SND1-212ENST00000485871 PAK2Q13177 524 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 SYCP1Q15431 976 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 SURF1Q15526 300 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 TCTN1Q2MV58 587 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 ZACNQ401N2 412 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 EPC2Q52LR7 807 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 XKR4Q5GH76 650 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 SPECC1LQ69YQ0 1117 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 ALKAL1Q6UXT8 129 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 TMC6Q7Z403 805 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 RTN4RL1Q86UN2 441 aaPredicted RBP12.26□□□□□ -0.45
SND1-212ENST00000485871 EFCAB13Q8IY85 973 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 TDHQ8IZJ6 230 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 CACTINQ8WUQ7 758 aaKnown RBP12.26□□□□□ -0.45
SND1-212ENST00000485871 CCDC127Q96BQ5 260 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 CXCL16Q9H2A7 254 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 HIPK3Q9H422 1215 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 RPF1Q9H9Y2 349 aaKnown RBP12.26□□□□□ -0.45
SND1-212ENST00000485871 TMEM8AQ9HCN3 771 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 SIX2Q9NPC8 291 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 FAM105AQ9NUU6 356 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 ATP11BQ9Y2G3 1177 aa12.26□□□□□ -0.45
SND1-212ENST00000485871 HES2Q9Y543 173 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms