RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 RPL17P18621 184 aaKnown RBP15.12■□□□□ 0.01
SCAF4-206ENST00000485790 FSHRP23945 695 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 SMTNP53814 917 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 DMP1Q13316 513 aaPredicted RBP15.12■□□□□ 0.01
SCAF4-206ENST00000485790 PSMD5Q16401 504 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 RTP2Q5QGT7 225 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 PPM1LQ5SGD2 360 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 NT5DC1Q5TFE4 455 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 MCTP1Q6DN14 999 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 PRSS55Q6UWB4 352 aaPredicted RBP15.12■□□□□ 0.01
SCAF4-206ENST00000485790 SIX5Q8N196 739 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 TMEM105Q8N8V8 129 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 IGSF22Q8N9C0 903 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 LNX1Q8TBB1 728 aaPredicted RBP15.12■□□□□ 0.01
SCAF4-206ENST00000485790 HASPINQ8TF76 798 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 CLSTN3Q9BQT9 956 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 PAAF1Q9BRP4 392 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 TIPINQ9BVW5 301 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 MRPL4Q9BYD3 311 aaKnown RBP15.12■□□□□ 0.01
SCAF4-206ENST00000485790 SMOC2Q9H3U7 446 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 TMEM134Q9H6X4 195 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 POLD4Q9HCU8 107 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 SLC38A7Q9NVC3 462 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 KIF4AO95239 1232 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 PRPHP41219 470 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 NPTX2P47972 431 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 PEX3P56589 373 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 STRN3Q13033 797 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 ECM1Q16610 540 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 RILPL1Q5EBL4 403 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.11■□□□□ 0.01
SCAF4-206ENST00000485790 PHOX2BQ99453 314 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 UPF2Q9HAU5 1272 aaKnown RBP15.11■□□□□ 0.01
SCAF4-206ENST00000485790 KMT5AQ9NQR1 393 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 USP20Q9Y2K6 914 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 PCDHB6Q9Y5E3 794 aa15.11■□□□□ 0.01
SCAF4-206ENST00000485790 ATG2AQ2TAZ0 1938 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 SMIM28A0A1B0GU29 152 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 H3BQV1 296 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 GFRA3O60609 400 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 AOC1P19801 751 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 OR1D2P34982 312 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 TOB1P50616 345 aaPredicted RBP15.1■□□□□ 0.01
SCAF4-206ENST00000485790 RAB33AQ14088 237 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 RABEP1Q15276 862 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 ZRSR1Q15695 479 aaKnown RBP15.1■□□□□ 0.01
SCAF4-206ENST00000485790 EEF1DP3Q658K8 133 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 ANKS3Q6ZW76 656 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 ACAP3Q96P50 834 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 MYADMQ96S97 322 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 ACO2Q99798 780 aaKnown RBP15.1■□□□□ 0.01
SCAF4-206ENST00000485790 NTPCRQ9BSD7 190 aaKnown RBP15.1■□□□□ 0.01
SCAF4-206ENST00000485790 KIFC3Q9BVG8 833 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 POLIQ9UNA4 740 aa15.1■□□□□ 0.01
SCAF4-206ENST00000485790 E9PMD0 336 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 TMEM189-UBE2V1I3L0A0 370 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 N4BP1O75113 896 aaKnown RBP15.09■□□□□ 0.01
SCAF4-206ENST00000485790 HIP1RO75146 1068 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 C8AP07357 584 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 CFHP08603 1231 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 MCF2P10911 925 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 SRFP11831 508 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 FGFR3P22607 806 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 HOXA9P31269 272 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 ELF1P32519 619 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 RPL9P32969 192 aaKnown RBP15.09■□□□□ 0.01
SCAF4-206ENST00000485790 GRM5P41594 1212 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 CLCNKBP51801 687 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 NBR1Q14596 966 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 UPP1Q16831 310 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 AXDND1Q5T1B0 1012 aaPredicted RBP15.09■□□□□ 0.01
SCAF4-206ENST00000485790 GET4Q7L5D6 327 aaPredicted RBP15.09■□□□□ 0.01
SCAF4-206ENST00000485790 GRASPQ7Z6J2 395 aaPredicted RBP15.09■□□□□ 0.01
SCAF4-206ENST00000485790 FEZF2Q8TBJ5 459 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 RSAD2Q8WXG1 361 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 SHDQ96IW2 340 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 CDK5RAP3Q96JB5 506 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 PPP1R10Q96QC0 940 aaKnown RBP15.09■□□□□ 0.01
SCAF4-206ENST00000485790 FAM86C1Q9NVL1 165 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 CACNG4Q9UBN1 327 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 FBXW11Q9UKB1 542 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 CDH7Q9ULB5 785 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 BACE2Q9Y5Z0 518 aa15.09■□□□□ 0.01
SCAF4-206ENST00000485790 ZFHX2Q9C0A1 2572 aaPredicted RBP15.08■□□□□ 0
SCAF4-206ENST00000485790 PROB1E7EW31 1015 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 ANHXE9PGG2 379 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 H0YCG3 227 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 H7C4K7 107 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 OSTNP61366 133 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 NAB2Q15742 525 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 ZNF568Q3ZCX4 644 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 RINT1Q6NUQ1 792 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 C1orf186Q6ZWK4 172 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 MTSS1LQ765P7 747 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 KIF2CQ99661 725 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 KCND2Q9NZV8 630 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 NUB1Q9Y5A7 615 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 ZDBF2Q9HCK1 2354 aa15.08■□□□□ 0
SCAF4-206ENST00000485790 SFI1A8K8P3 1242 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms