RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 PABPC3Q9H361 631 aaKnown RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 RIOX1Q9H6W3 641 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 NOD2Q9HC29 1040 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 POLD4Q9HCU8 107 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 NLRC4Q9NPP4 1024 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 ABI2Q9NYB9 513 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 CNOT7Q9UIV1 285 aaKnown RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 PACSIN2Q9UNF0 486 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 MINPP1Q9UNW1 487 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 MTMR7Q9Y216 660 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 C15orf41Q9Y2V0 281 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 GOLGA6L10A0A0M3HER8 536 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 GTPBP10A4D1E9 387 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 KLRF2D3W0D1 207 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 O00370 1275 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 TRAF5O00463 557 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 PPP1R12AO14974 1030 aaPredicted RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CETN3O15182 167 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 DDX3YO15523 660 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 TTI1O43156 1089 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SLC37A4O43826 429 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 EDIL3O43854 480 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CTNND1O60716 968 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 GGPS1O95749 300 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 AFPP02771 609 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 MMEP08473 750 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 H2AFZP0C0S5 128 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SNHG28P0DPA3 235 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ALAS1P13196 640 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ITGA4P13612 1032 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 UCHL3P15374 230 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CHN1P15882 459 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SELPP16109 830 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 FERP16591 822 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SCP2P22307 547 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CALRP27797 417 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 FLT3P36888 993 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SKIV2L2P42285 1042 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ADCY7P51828 1080 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CCNG1P51959 295 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 HADHBP55084 474 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 NCALDP61601 193 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 PPATQ06203 517 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 KLRC3Q07444 240 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ADCY2Q08462 1091 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 HYAL2Q12891 473 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 GRIK3Q13003 919 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 EPHA7Q15375 998 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ZKSCAN8Q15776 578 aaPredicted RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 GRIK5Q16478 980 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 NFIL3Q16649 462 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 GALNTL6Q49A17 601 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CMPK2Q5EBM0 449 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SLC10A5Q5PT55 438 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ALKBH5Q6P6C2 394 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ZDHHC24Q6UX98 284 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CLEC4GQ6UXB4 293 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 C16orf86Q6ZW13 317 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 H2AFVQ71UI9 128 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 EPM2AIP1Q7L775 607 aaPredicted RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 PEX26Q7Z412 305 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 KCNK18Q7Z418 384 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CPLX4Q7Z7G2 160 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 VPS36Q86VN1 386 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 DDX42Q86XP3 938 aaKnown RBP eCLIP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CEP57Q86XR8 500 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CCDC65Q8IXS2 484 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 IL22RA1Q8N6P7 574 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 GBP7Q8N8V2 638 aaPredicted RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CCDC63Q8NA47 563 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 GLIS3Q8NEA6 775 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 OR13H1Q8NG92 308 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SCFD1Q8WVM8 642 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 RFFLQ8WZ73 363 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 RSRC1Q96IZ7 334 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 MBOAT7Q96N66 472 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SCLT1Q96NL6 688 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 PLCD4Q9BRC7 762 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ERP44Q9BS26 406 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SYT11Q9BT88 431 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 TRIM6Q9C030 488 aaPredicted RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 TANGO6Q9C0B7 1094 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ANKRD2Q9GZV1 360 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 NT5C3AQ9H0P0 336 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 CENPHQ9H3R5 247 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 MKNK2Q9HBH9 465 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ZNF287Q9HBT7 754 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SIX2Q9NPC8 291 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 PANK4Q9NVE7 773 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 MCM9Q9NXL9 1143 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 PARP2Q9UGN5 583 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SEC63Q9UGP8 760 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ADAMTS1Q9UHI8 967 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 TRAF3IP3Q9Y228 551 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 ZNF652Q9Y2D9 606 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 UTP11Q9Y3A2 253 aaKnown RBP5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 SBF2Q86WG5 1849 aa5.06□□□□□ -1.6
SMARCC1-206ENST00000485737 FRMPD4Q14CM0 1322 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 RPTORQ8N122 1335 aa5.05□□□□□ -1.6
SMARCC1-206ENST00000485737 SYNGAP1Q96PV0 1343 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms