RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 CBWD2Q8IUF1 395 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 LRRC43Q8N309 656 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 GPD1LQ8N335 351 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 TMEM130Q8N3G9 435 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 RPS6KC1Q96S38 1066 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 C17orf80Q9BSJ5 609 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 GTPBP4Q9BZE4 634 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 NRDE2Q9H7Z3 1164 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 CERS4Q9HA82 394 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 DMAC2Q9NW81 257 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 CACNG4Q9UBN1 327 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 MTUS1Q9ULD2 1270 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 TRAF3IP3Q9Y228 551 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 NR3C1P04150 777 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 ADRB2P07550 413 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 PTMSP20962 102 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 PBX3P40426 434 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 RNASELQ05823 741 aaKnown RBP16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 KYAT1Q16773 422 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 SPOUT1Q5T280 376 aaKnown RBP16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 CENPPQ6IPU0 288 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 RDH13Q8NBN7 331 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 GOLGA5Q8TBA6 731 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 CLP1Q92989 425 aaKnown RBP16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 FBXL18Q96ME1 805 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 MRPL9Q9BYD2 267 aaKnown RBP16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 SLC28A3Q9HAS3 691 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 TOPORSQ9NS56 1045 aaPredicted RBP16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 CNTN3Q9P232 1028 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 KANSL3Q9P2N6 904 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 DNAJB4Q9UDY4 337 aa16.85■□□□□ 0.29
RPUSD3-217ENST00000485705 SMIM28A0A1B0GU29 152 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 TULP1O00294 542 aaPredicted RBP16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 CALUO43852 315 aaPredicted RBP16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 LDHAP00338 332 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 CCNE1P24864 410 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 CASP4P49662 377 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 STX17P56962 302 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 NLRP12P59046 1061 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 GRIK3Q13003 919 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 STIM1Q13586 685 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 NAB2Q15742 525 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 DPCR1Q3MIW9 517 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 ANKRD40Q6AI12 368 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 BRSK2Q8IWQ3 736 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 XXYLT1Q8NBI6 393 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 NELFBQ8WX92 580 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 P2RX5Q93086 422 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 EEF2KMTQ96G04 330 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 DHTKD1Q96HY7 919 aaPredicted RBP16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 PPP1R10Q96QC0 940 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 TGS1Q96RS0 853 aaKnown RBP16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 TTYH1Q9H313 450 aaPredicted RBP16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
RPUSD3-217ENST00000485705 NT5C1B-RDH14C9J2C7 533 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 PSMA7O14818 248 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 EXOC3O60645 756 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 ZC3H11AO75152 810 aaKnown RBP eCLIP16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 THP07101 528 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 KCNE1P15382 129 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 FXR1P51114 621 aaKnown RBP eCLIP16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 BCAR1P56945 870 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 ERVK-21P61565 698 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 PPP2R3AQ06190 1150 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 SOX4Q06945 474 aaPredicted RBP16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 DSC1Q08554 894 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 SLC9A9Q8IVB4 645 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 COLGALT2Q8IYK4 626 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 COLGALT1Q8NBJ5 622 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 RSPH1Q8WYR4 309 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 RABGGTAQ92696 567 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 C18orf25Q96B23 403 aaPredicted RBP16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 FAM84AQ96KN4 292 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 FAM193BQ96PV7 902 aaPredicted RBP16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 ZNF576Q9H609 170 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 PLEKHA5Q9HAU0 1116 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 PLXNA4Q9HCM2 1894 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 PDE11AQ9HCR9 933 aa16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 RBAKQ9NYW8 714 aaPredicted RBP16.83■□□□□ 0.28
RPUSD3-217ENST00000485705 SCN1AP35498 2009 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 EPOPA6NHQ4 379 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 CASTOR2A6NHX0 329 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 ZNF233A6NK53 670 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 NFICP08651 508 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 NR2F2P24468 414 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 CTNNB1P35222 781 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 BMPR1AP36894 532 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 PPP1R2P41236 205 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 SLC11A1P49279 550 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 GUCY2FP51841 1108 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 ADAM9Q13443 819 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 ZBTB6Q15916 424 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 SNRNP35Q16560 246 aaKnown RBP16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 NFIL3Q16649 462 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 EPC2Q52LR7 807 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 CEP135Q66GS9 1140 aa16.82■□□□□ 0.28
RPUSD3-217ENST00000485705 JADE1Q6IE81 842 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms