RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 TNFSF13BQ9Y275 285 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 TRIP11Q15643 1979 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 N4BP1O75113 896 aaKnown RBP28.25■■■□□ 2.11
HLA-F-227ENST00000485513 GBP2P32456 591 aaPredicted RBP28.25■■■□□ 2.11
HLA-F-227ENST00000485513 ELAVL2Q12926 359 aaKnown RBP28.25■■■□□ 2.11
HLA-F-227ENST00000485513 DMP1Q13316 513 aaPredicted RBP28.25■■■□□ 2.11
HLA-F-227ENST00000485513 TDGQ13569 410 aa28.25■■■□□ 2.11
HLA-F-227ENST00000485513 TMX3Q96JJ7 454 aa28.25■■■□□ 2.11
HLA-F-227ENST00000485513 DRC1Q96MC2 740 aa28.25■■■□□ 2.11
HLA-F-227ENST00000485513 RUSC1Q9BVN2 902 aa28.25■■■□□ 2.11
HLA-F-227ENST00000485513 PSMD5Q16401 504 aa28.24■■■□□ 2.11
HLA-F-227ENST00000485513 GLRA4Q5JXX5 417 aa28.24■■■□□ 2.11
HLA-F-227ENST00000485513 RINT1Q6NUQ1 792 aa28.24■■■□□ 2.11
HLA-F-227ENST00000485513 KCNK18Q7Z418 384 aa28.24■■■□□ 2.11
HLA-F-227ENST00000485513 LNX1Q8TBB1 728 aaPredicted RBP28.24■■■□□ 2.11
HLA-F-227ENST00000485513 PRKD2Q9BZL6 878 aa28.24■■■□□ 2.11
HLA-F-227ENST00000485513 TMEM134Q9H6X4 195 aa28.24■■■□□ 2.11
HLA-F-227ENST00000485513 IGSF9Q9P2J2 1179 aa28.24■■■□□ 2.11
HLA-F-227ENST00000485513 ATP2C1P98194 919 aaPredicted RBP28.23■■■□□ 2.11
HLA-F-227ENST00000485513 ZRSR1Q15695 479 aaKnown RBP28.23■■■□□ 2.11
HLA-F-227ENST00000485513 C1orf186Q6ZWK4 172 aa28.23■■■□□ 2.11
HLA-F-227ENST00000485513 PPP1R10Q96QC0 940 aaKnown RBP28.23■■■□□ 2.11
HLA-F-227ENST00000485513 PHOX2BQ99453 314 aa28.23■■■□□ 2.11
HLA-F-227ENST00000485513 ACO2Q99798 780 aaKnown RBP28.23■■■□□ 2.11
HLA-F-227ENST00000485513 CLSTN3Q9BQT9 956 aa28.23■■■□□ 2.11
HLA-F-227ENST00000485513 MRPL4Q9BYD3 311 aaKnown RBP28.23■■■□□ 2.11
HLA-F-227ENST00000485513 MFSD1Q9H3U5 465 aa28.23■■■□□ 2.11
HLA-F-227ENST00000485513 KMT5AQ9NQR1 393 aa28.23■■■□□ 2.11
HLA-F-227ENST00000485513 ARHGAP28Q9P2N2 729 aa28.23■■■□□ 2.11
HLA-F-227ENST00000485513 CACNA1HO95180 2353 aa28.23■■■□□ 2.11
HLA-F-227ENST00000485513 VWA8A3KMH1 1905 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 H3BQV1 296 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 ZMYND10O75800 440 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 GJB2P29033 226 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 NUBP1P53384 320 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 MAPK7Q13164 816 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 ZNF568Q3ZCX4 644 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 PDXDC1Q6P996 788 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 CCDC94Q9BW85 323 aaPredicted RBP28.22■■■□□ 2.11
HLA-F-227ENST00000485513 CDT1Q9H211 546 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 C17orf75Q9HAS0 396 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 EPS15L1Q9UBC2 864 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 DUSP12Q9UNI6 340 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 RBM19Q9Y4C8 960 aaKnown RBP28.22■■■□□ 2.11
HLA-F-227ENST00000485513 DOCK8Q8NF50 2099 aa28.22■■■□□ 2.11
HLA-F-227ENST00000485513 TMEM189-UBE2V1I3L0A0 370 aa28.21■■■□□ 2.11
HLA-F-227ENST00000485513 B3GAT3O94766 335 aa28.21■■■□□ 2.11
HLA-F-227ENST00000485513 GRM5P41594 1212 aa28.21■■■□□ 2.11
HLA-F-227ENST00000485513 YARSP54577 528 aaKnown RBP28.21■■■□□ 2.11
HLA-F-227ENST00000485513 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.21■■■□□ 2.11
HLA-F-227ENST00000485513 TAS1R3Q7RTX0 852 aa28.21■■■□□ 2.11
HLA-F-227ENST00000485513 CEP120Q8N960 986 aa28.21■■■□□ 2.11
HLA-F-227ENST00000485513 MYADMQ96S97 322 aa28.21■■■□□ 2.11
HLA-F-227ENST00000485513 TIPINQ9BVW5 301 aa28.21■■■□□ 2.11
HLA-F-227ENST00000485513 TARS2Q9BW92 718 aaKnown RBP28.21■■■□□ 2.11
HLA-F-227ENST00000485513 IRF2BPLQ9H1B7 796 aa28.21■■■□□ 2.11
HLA-F-227ENST00000485513 UPF2Q9HAU5 1272 aaKnown RBP28.21■■■□□ 2.11
HLA-F-227ENST00000485513 TOPORSQ9NS56 1045 aaPredicted RBP28.21■■■□□ 2.11
HLA-F-227ENST00000485513 FBXW11Q9UKB1 542 aa28.21■■■□□ 2.11
HLA-F-227ENST00000485513 CD2BP2O95400 341 aaKnown RBP28.2■■■□□ 2.1
HLA-F-227ENST00000485513 HYIQ5T013 277 aa28.2■■■□□ 2.1
HLA-F-227ENST00000485513 LIN9Q5TKA1 542 aa28.2■■■□□ 2.1
HLA-F-227ENST00000485513 ASTLQ6HA08 431 aaPredicted RBP28.2■■■□□ 2.1
HLA-F-227ENST00000485513 DCLRE1AQ6PJP8 1040 aa28.2■■■□□ 2.1
HLA-F-227ENST00000485513 TMEM105Q8N8V8 129 aa28.2■■■□□ 2.1
HLA-F-227ENST00000485513 UROC1Q96N76 676 aa28.2■■■□□ 2.1
HLA-F-227ENST00000485513 PTPRHQ9HD43 1115 aa28.2■■■□□ 2.1
HLA-F-227ENST00000485513 SMIM28A0A1B0GU29 152 aa28.19■■■□□ 2.1
HLA-F-227ENST00000485513 GUCY2CP25092 1073 aa28.19■■■□□ 2.1
HLA-F-227ENST00000485513 CLCNKBP51801 687 aa28.19■■■□□ 2.1
HLA-F-227ENST00000485513 OSTNP61366 133 aa28.19■■■□□ 2.1
HLA-F-227ENST00000485513 GOLGA2P5Q9HBQ8 144 aa28.19■■■□□ 2.1
HLA-F-227ENST00000485513 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.19■■■□□ 2.1
HLA-F-227ENST00000485513 FBXL21Q9UKT6 434 aa28.19■■■□□ 2.1
HLA-F-227ENST00000485513 MYH11P35749 1972 aa28.19■■■□□ 2.1
HLA-F-227ENST00000485513 VWA3AA6NCI4 1184 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 SFI1A8K8P3 1242 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 SLC16A4O15374 487 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 ADAM12O43184 909 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 GALR2O43603 387 aaPredicted RBP28.18■■■□□ 2.1
HLA-F-227ENST00000485513 FGFR3P22607 806 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 IGFBP6P24592 240 aaPredicted RBP28.18■■■□□ 2.1
HLA-F-227ENST00000485513 UPP1Q16831 310 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 GET4Q7L5D6 327 aaPredicted RBP28.18■■■□□ 2.1
HLA-F-227ENST00000485513 KCTD17Q8N5Z5 321 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 RSAD2Q8WXG1 361 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 PNMA5Q96PV4 448 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 TCHPQ9BT92 498 aa28.18■■■□□ 2.1
HLA-F-227ENST00000485513 HNRNPA1P09651 372 aaKnown RBP eCLIP28.17■■■□□ 2.1
HLA-F-227ENST00000485513 MCF2P10911 925 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 MCM2P49736 904 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 CLCN5P51795 746 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 RAD51AP2Q09MP3 1159 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 XKR4Q5GH76 650 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 PPM1LQ5SGD2 360 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 ALKAL1Q6UXT8 129 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 SYT2Q8N9I0 419 aaPredicted RBP28.17■■■□□ 2.1
HLA-F-227ENST00000485513 FLCNQ8NFG4 579 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 NXPE3Q969Y0 559 aa28.17■■■□□ 2.1
HLA-F-227ENST00000485513 CDK5RAP3Q96JB5 506 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms