RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
APTX-227ENST00000485479 BCL7CQ8WUZ0 217 aaPredicted RBP12.95□□□□□ -0.34
APTX-227ENST00000485479 KCNN1Q92952 543 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
APTX-227ENST00000485479 C18orf25Q96B23 403 aaPredicted RBP12.95□□□□□ -0.34
APTX-227ENST00000485479 SNX27Q96L92 541 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 GSDMAQ96QA5 445 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 KCTD10Q9H3F6 313 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 TMEM206Q9H813 350 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 HOOK1Q9UJC3 728 aaKnown RBP12.95□□□□□ -0.34
APTX-227ENST00000485479 PRG3Q9Y2Y8 225 aaPredicted RBP12.95□□□□□ -0.34
APTX-227ENST00000485479 MYO7AQ13402 2215 aa12.95□□□□□ -0.34
APTX-227ENST00000485479 HOXA2O43364 376 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 YARSP54577 528 aaKnown RBP12.94□□□□□ -0.34
APTX-227ENST00000485479 SOX4Q06945 474 aaPredicted RBP12.94□□□□□ -0.34
APTX-227ENST00000485479 BMT2Q1RMZ1 405 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 ZNF658Q5TYW1 1059 aaPredicted RBP12.94□□□□□ -0.34
APTX-227ENST00000485479 SCARA3Q6AZY7 606 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 CBWD2Q8IUF1 395 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 HACE1Q8IYU2 909 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 URGCPQ8TCY9 931 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 TGS1Q96RS0 853 aaKnown RBP12.94□□□□□ -0.34
APTX-227ENST00000485479 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 HSPBP1Q9NZL4 362 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 TMEM63CQ9P1W3 806 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 CPSF3Q9UKF6 684 aaKnown RBP12.94□□□□□ -0.34
APTX-227ENST00000485479 GIT1Q9Y2X7 761 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 PCDHGC5Q9Y5F6 944 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 STYXL1Q9Y6J8 313 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 SMIM28A0A1B0GU29 152 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 ITGB1P05556 798 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 OR1G1P47890 313 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 SLC11A1P49279 550 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 BCAR1P56945 870 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 PSMD2Q13200 908 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 KLHL23Q8NBE8 558 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 COLGALT1Q8NBJ5 622 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
APTX-227ENST00000485479 ADRB2P07550 413 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 NFICP08651 508 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 CASP4P49662 377 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 STX17P56962 302 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 NAB2Q15742 525 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 JADE1Q6IE81 842 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 CAVIN1Q6NZI2 390 aaKnown RBP12.93□□□□□ -0.34
APTX-227ENST00000485479 KCNT2Q6UVM3 1135 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 MYLIPQ8WY64 445 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 CLP1Q92989 425 aaKnown RBP12.93□□□□□ -0.34
APTX-227ENST00000485479 RPF1Q9H9Y2 349 aaKnown RBP12.93□□□□□ -0.34
APTX-227ENST00000485479 RMND1Q9NWS8 449 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 PDCD11Q14690 1871 aaKnown RBP12.93□□□□□ -0.34
APTX-227ENST00000485479 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 UBE4BO95155 1302 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 ATG2AQ2TAZ0 1938 aa12.93□□□□□ -0.34
APTX-227ENST00000485479 GRM6O15303 877 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 THP07101 528 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 CLTAP09496 248 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 DNAJB1P25685 340 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 ERVK-21P61565 698 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 MORC3Q14149 939 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 ADGRE1Q14246 886 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 SLFN12LQ6IEE8 588 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 ALKAL1Q6UXT8 129 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 HS2ST1Q7LGA3 356 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 APBB1IPQ7Z5R6 666 aaPredicted RBP12.92□□□□□ -0.34
APTX-227ENST00000485479 COLGALT2Q8IYK4 626 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 KIF12Q96FN5 646 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 B3GALT6Q96L58 329 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 GUCD1Q96NT3 240 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 FAM193BQ96PV7 902 aaPredicted RBP12.92□□□□□ -0.34
APTX-227ENST00000485479 MRPL9Q9BYD2 267 aaKnown RBP12.92□□□□□ -0.34
APTX-227ENST00000485479 PDE11AQ9HCR9 933 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 TOPORSQ9NS56 1045 aaPredicted RBP12.92□□□□□ -0.34
APTX-227ENST00000485479 RBAKQ9NYW8 714 aaPredicted RBP12.92□□□□□ -0.34
APTX-227ENST00000485479 CTNND2Q9UQB3 1225 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 TTC26A0AVF1 554 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 NR3C1P04150 777 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 GALTP07902 379 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 ABCD1P33897 745 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 BMPR1AP36894 532 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 PPP2R3AQ06190 1150 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 GRIK3Q13003 919 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 DPCR1Q3MIW9 517 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 CEP135Q66GS9 1140 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 EFCAB13Q8IY85 973 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 GPD1LQ8N335 351 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 PPP1R10Q96QC0 940 aaKnown RBP12.92□□□□□ -0.34
APTX-227ENST00000485479 POP1Q99575 1024 aaKnown RBP12.92□□□□□ -0.34
APTX-227ENST00000485479 UBN1Q9NPG3 1134 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 CNTN3Q9P232 1028 aa12.92□□□□□ -0.34
APTX-227ENST00000485479 PTPRJQ12913 1337 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 I3L4J1 428 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 NRP1O14786 923 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 PPEF2O14830 753 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 LPXNO60711 386 aa12.91□□□□□ -0.34
APTX-227ENST00000485479 FGF18O76093 207 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms