RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 LANCL2Q9NS86 450 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 C14orf119Q9NWQ9 140 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 DNM3Q9UQ16 869 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 HS3ST4Q9Y661 456 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 ZAR1LA6NP61 321 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 CXorf49A8MYA2 514 aaPredicted RBP5.68□□□□□ -1.5
SMC4-215ENST00000484799 ZNF185O15231 689 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 TEX33O43247 280 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 ENDOD1O94919 500 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 LMNAP02545 664 aaKnown RBP5.68□□□□□ -1.5
SMC4-215ENST00000484799 PTTG1IPP53801 180 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 CREMQ03060 361 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 CLUL1Q15846 466 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 ADRM1Q16186 407 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 MST1LQ2TV78 715 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 ANO4Q32M45 955 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 BEAN1Q3B7T3 259 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 ABHD17BQ5VST6 288 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 DRC7Q8IY82 874 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.68□□□□□ -1.5
SMC4-215ENST00000484799 FBXO18Q8NFZ0 1043 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 LMBR1Q8WVP7 490 aa5.68□□□□□ -1.5
SMC4-215ENST00000484799 MTO1Q9Y2Z2 717 aaKnown RBP5.68□□□□□ -1.5
SMC4-215ENST00000484799 ADCY6O43306 1168 aa5.67□□□□□ -1.5
SMC4-215ENST00000484799 ERN1O75460 977 aaKnown RBP5.67□□□□□ -1.5
SMC4-215ENST00000484799 ITGAMP11215 1152 aa5.67□□□□□ -1.5
SMC4-215ENST00000484799 Q6ZPA2 131 aa5.67□□□□□ -1.5
SMC4-215ENST00000484799 ZNF572Q7Z3I7 529 aaPredicted RBP5.67□□□□□ -1.5
SMC4-215ENST00000484799 ZNF575Q86XF7 245 aa5.67□□□□□ -1.5
SMC4-215ENST00000484799 SYT12Q8IV01 421 aa5.67□□□□□ -1.5
SMC4-215ENST00000484799 SLC35B2Q8TB61 432 aa5.67□□□□□ -1.5
SMC4-215ENST00000484799 CYFIP2Q96F07 1278 aa5.67□□□□□ -1.5
SMC4-215ENST00000484799 TMX1Q9H3N1 280 aa5.67□□□□□ -1.5
SMC4-215ENST00000484799 CHST2Q9Y4C5 530 aa5.67□□□□□ -1.5
SMC4-215ENST00000484799 COL4A3Q01955 1670 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 SHROOM4Q9ULL8 1493 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 PIPSLA2A3N6 862 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 CDKL5O76039 1030 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 ALAS1P13196 640 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 SRSF2Q01130 221 aaKnown RBP5.66□□□□□ -1.5
SMC4-215ENST00000484799 UBXN2BQ14CS0 331 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 FAM102AQ5T9C2 384 aaPredicted RBP5.66□□□□□ -1.5
SMC4-215ENST00000484799 RNF219Q5W0B1 726 aaPredicted RBP5.66□□□□□ -1.5
SMC4-215ENST00000484799 AFMIDQ63HM1 303 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 GIMAP6Q6P9H5 292 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 OLFML1Q6UWY5 402 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 MAPKAPK5Q8IW41 473 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 RHOT2Q8IXI1 618 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 CMIPQ8IY22 773 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 TRMT2AQ8IZ69 625 aaKnown RBP5.66□□□□□ -1.5
SMC4-215ENST00000484799 BEND2Q8NDZ0 799 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 OR56A1Q8NGH5 318 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 CCHCR1Q8TD31 782 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 RNF31Q96EP0 1072 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 COQ10AQ96MF6 247 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 TEX101Q9BY14 249 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 ALOXE3Q9BYJ1 711 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 RNPEPQ9H4A4 650 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 MANSC1Q9H8J5 431 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 TBCCD1Q9NVR7 557 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 PTGFRNQ9P2B2 879 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 SAP30BPQ9UHR5 308 aaKnown RBP5.66□□□□□ -1.5
SMC4-215ENST00000484799 PCDHGA2Q9Y5H1 932 aa5.66□□□□□ -1.5
SMC4-215ENST00000484799 FAM171A2A8MVW0 826 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 KIAA0355O15063 1070 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 CXCR5P32302 372 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 MALLQ13021 153 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 TP53BP2Q13625 1128 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 ZNF529Q6P280 563 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 SPATS2Q86XZ4 545 aaKnown RBP5.65□□□□□ -1.5
SMC4-215ENST00000484799 FAM43AQ8N2R8 423 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 CAGE1Q8TC20 777 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 TSPEARQ8WU66 669 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 SLC9A6Q92581 669 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 FUBP3Q96I24 572 aaKnown RBP eCLIP5.65□□□□□ -1.5
SMC4-215ENST00000484799 C7orf25Q9BPX7 421 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 LDAHQ9H6V9 325 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 CASS4Q9NQ75 786 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 DMTF1Q9Y222 760 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 INSL6Q9Y581 213 aa5.65□□□□□ -1.5
SMC4-215ENST00000484799 GPANK1O95872 356 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 ALOX15P16050 662 aaPredicted RBP5.64□□□□□ -1.51
SMC4-215ENST00000484799 SREBF1P36956 1147 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 MPP3Q13368 585 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 AGAP9Q5VTM2 703 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 Q6YL49 198 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 Q6ZVL8 140 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 TMEM132CQ8N3T6 1108 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 PPM1NQ8N819 430 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 NELL1Q92832 810 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 RSAD1Q9HA92 442 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 VTA1Q9NP79 307 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 MCM8Q9UJA3 840 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 AJAP1Q9UKB5 411 aaPredicted RBP5.64□□□□□ -1.51
SMC4-215ENST00000484799 PRKAB1Q9Y478 270 aa5.64□□□□□ -1.51
SMC4-215ENST00000484799 A0A1B0GTW7 788 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 GRID2IPA4D2P6 1211 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 CFIP05156 583 aa5.63□□□□□ -1.51
SMC4-215ENST00000484799 OSMP13725 252 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms