RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CCDC78A2IDD5 438 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 PHF2O75151 1096 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 HLA-DOAP06340 250 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 B3GNTL1Q67FW5 361 aaPredicted RBP6.21□□□□□ -1.42
SCAF11-207ENST00000484275 GPR149Q86SP6 731 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 UBR7Q8N806 425 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 FAM98AQ8NCA5 519 aaKnown RBP6.21□□□□□ -1.42
SCAF11-207ENST00000484275 SIMC1Q8NDZ2 872 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 OR7D4Q8NG98 312 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 TGFBRAP1Q8WUH2 860 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 RAX2Q96IS3 184 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 PAWRQ96IZ0 340 aaKnown RBP6.21□□□□□ -1.42
SCAF11-207ENST00000484275 VTA1Q9NP79 307 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 COX11Q9Y6N1 276 aa6.21□□□□□ -1.42
SCAF11-207ENST00000484275 ZEB2O60315 1214 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 ULK1O75385 1050 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 CDKL5O76039 1030 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 ESRRBO95718 433 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 ITGAMP11215 1152 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 ZNF37AP17032 561 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-207ENST00000484275 SREBF1P36956 1147 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 GYS2P54840 703 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 RAP2BP61225 183 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 STRN3Q13033 797 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 ADRM1Q16186 407 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 MED25Q71SY5 747 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 RD3Q7Z3Z2 195 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 MAPKAPK5Q8IW41 473 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 LMBR1Q8WVP7 490 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 HOXB13Q92826 284 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-207ENST00000484275 TTC1Q99614 292 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 ZSWIM1Q9BR11 485 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 QRSL1Q9H0R6 528 aaKnown RBP6.2□□□□□ -1.42
SCAF11-207ENST00000484275 BCO1Q9HAY6 547 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 ATP11BQ9Y2G3 1177 aa6.2□□□□□ -1.42
SCAF11-207ENST00000484275 SNRPA1P09661 255 aaKnown RBP6.19□□□□□ -1.42
SCAF11-207ENST00000484275 MRPS9P82933 396 aaKnown RBP6.19□□□□□ -1.42
SCAF11-207ENST00000484275 OCA2Q04671 838 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 PPP3CAQ08209 521 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 MUM1Q2TAK8 710 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 TSHZ3Q63HK5 1081 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 AFMIDQ63HM1 303 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 FBXO42Q6P3S6 717 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 SYCE2Q6PIF2 218 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 DDX46Q7L014 1031 aaKnown RBP6.19□□□□□ -1.42
SCAF11-207ENST00000484275 KCNK18Q7Z418 384 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 TMEM132CQ8N3T6 1108 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 SLC44A3Q8N4M1 653 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 AUTS2Q8WXX7 1259 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 ORAI2Q96SN7 254 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 DMRT3Q9NQL9 472 aa6.19□□□□□ -1.42
SCAF11-207ENST00000484275 PRSS23O95084 383 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 CXCR5P32302 372 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 SP140Q13342 867 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 STON2Q8WXE9 905 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 MRI1Q9BV20 369 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 IFT122Q9HBG6 1241 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 RNF181Q9P0P0 153 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 SIK3Q9Y2K2 1263 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 TBX22Q9Y458 520 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 MAST3O60307 1309 aa6.18□□□□□ -1.42
SCAF11-207ENST00000484275 A0A1B0GTW7 788 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 FOSP01100 380 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-207ENST00000484275 FPR1P21462 350 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 SLC6A2P23975 617 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 ECHS1P30084 290 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 GUCY1A2P33402 732 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 BLOC1S1P78537 153 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 MPP3Q13368 585 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 ZNF362Q5T0B9 420 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-207ENST00000484275 FUBP1Q96AE4 644 aaKnown RBP6.17□□□□□ -1.42
SCAF11-207ENST00000484275 FUBP3Q96I24 572 aaKnown RBP eCLIP6.17□□□□□ -1.42
SCAF11-207ENST00000484275 Q96MF0 132 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 ALOXE3Q9BYJ1 711 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 LDAHQ9H6V9 325 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 ADARB2Q9NS39 739 aaKnown RBP6.17□□□□□ -1.42
SCAF11-207ENST00000484275 SLC23A1Q9UHI7 598 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 APOBEC2Q9Y235 224 aaKnown RBP6.17□□□□□ -1.42
SCAF11-207ENST00000484275 INSL6Q9Y581 213 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 SPATA31A6Q5VVP1 1343 aa6.17□□□□□ -1.42
SCAF11-207ENST00000484275 GOLGA8AA7E2F4 631 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 LMO1P25800 156 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 ALDH1A3P47895 512 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 SCAND1P57086 179 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 RRP12Q5JTH9 1297 aaKnown RBP6.16□□□□□ -1.42
SCAF11-207ENST00000484275 ARMC6Q6NXE6 501 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 PQLC1Q8N2U9 271 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 NACC2Q96BF6 587 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 MYOCQ99972 504 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 GREM2Q9H772 168 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 FBXO34Q9NWN3 711 aa6.16□□□□□ -1.42
SCAF11-207ENST00000484275 MGST3O14880 152 aa6.15□□□□□ -1.42
SCAF11-207ENST00000484275 RAP2AP10114 183 aa6.15□□□□□ -1.42
SCAF11-207ENST00000484275 FGFR4P22455 802 aa6.15□□□□□ -1.42
SCAF11-207ENST00000484275 FDXRP22570 491 aa6.15□□□□□ -1.42
SCAF11-207ENST00000484275 SRSF2Q01130 221 aaKnown RBP6.15□□□□□ -1.42
SCAF11-207ENST00000484275 UBXN2BQ14CS0 331 aa6.15□□□□□ -1.42
SCAF11-207ENST00000484275 SEPT2Q15019 361 aa6.15□□□□□ -1.42
SCAF11-207ENST00000484275 MUM1L1Q5H9M0 696 aa6.15□□□□□ -1.42
SCAF11-207ENST00000484275 TOR2AQ5JU69 321 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms