RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ARMCX5Q6P1M9 558 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 CRIPAKQ8N1N5 446 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 NME8Q8N427 588 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 SLC17A8Q8NDX2 589 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 PRPF31Q8WWY3 499 aaKnown RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 BSNDQ8WZ55 320 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 CPB2Q96IY4 423 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 CNOT6LQ96LI5 555 aaKnown RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 TGS1Q96RS0 853 aaKnown RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 KIFC3Q9BVG8 833 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 NAA15Q9BXJ9 866 aaKnown RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 DHX33Q9H6R0 707 aaKnown RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 ZSWIM4Q9H7M6 989 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 IFT122Q9HBG6 1241 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 INTS13Q9NVM9 706 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 TAB2Q9NYJ8 693 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 PIN4Q9Y237 131 aaKnown RBP7.57□□□□□ -1.2
BRCA1-216ENST00000484087 INSL6Q9Y581 213 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 MTCH2Q9Y6C9 303 aa7.57□□□□□ -1.2
BRCA1-216ENST00000484087 A0A1W2PQC6 194 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 FRMD3A2A2Y4 597 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 TBKBP1A7MCY6 615 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 LGALS16A8MUM7 142 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 C9IYK1 514 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 GRM6O15303 877 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 ARHGAP6O43182 974 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 TEX33O43247 280 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 B4GALT5O43286 388 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 ZSCAN12O43309 604 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 CALUO43852 315 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 STX10O60499 249 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 TUBB4AP04350 444 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 GLRA2P23416 452 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 TMOD1P28289 359 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 PMS1P54277 932 aaKnown RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 PTPN5P54829 565 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 ERVK-21P61565 698 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 FKBP3Q00688 224 aaKnown RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 RAD51AP2Q09MP3 1159 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 LAMTOR4Q0VGL1 99 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 TBX2Q13207 712 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 GIT2Q14161 759 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 ARID5BQ14865 1188 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 SKIV2LQ15477 1246 aaKnown RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 APTXQ7Z2E3 356 aaKnown RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 FIBCD1Q8N539 461 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 RNF149Q8NC42 400 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 HELQQ8TDG4 1101 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 SLC7A3Q8WY07 619 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 HPS3Q969F9 1004 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 ZNF689Q96CS4 500 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 IQCDQ96DY2 449 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 PCMTD1Q96MG8 357 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 CEP63Q96MT8 703 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 PANX2Q96RD6 677 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 BAG1Q99933 345 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 TUBGCP2Q9BSJ2 902 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 NUP58Q9BVL2 599 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 POLR3FQ9H1D9 316 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 ALG13Q9NP73 1137 aaKnown RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 RGS18Q9NS28 235 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 SEL1LQ9UBV2 794 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 LRFN2Q9ULH4 789 aa7.56□□□□□ -1.2
BRCA1-216ENST00000484087 TDRD15B5MCY1 1934 aaKnown RBP7.56□□□□□ -1.2
BRCA1-216ENST00000484087 GOLGA6L9A6NEM1 432 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 BHMG1C9JSJ3 638 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 CETN3O15182 167 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 GPR182O15218 404 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 B4GALT3O60512 393 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 FECHP22830 423 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 DNAJB1P25685 340 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 GTF2F1P35269 517 aaKnown RBP eCLIP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 IRS1P35568 1242 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 TERF1P54274 439 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 PTPN14Q15678 1187 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 MAN2A1Q16706 1144 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 CCDC40Q4G0X9 1142 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 ARSHQ5FYA8 562 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 CLLU1OSQ5K130 101 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 RINT1Q6NUQ1 792 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 THSD4Q6ZMP0 1018 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 LRRC55Q6ZSA7 311 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 CATSPER4Q7RTX7 472 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 NPAS4Q8IUM7 802 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 TMEM192Q8IY95 271 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 C17orf53Q8N3J3 647 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 ZNF397Q8NF99 534 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 PSPC1Q8WXF1 523 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 DUSP9Q99956 384 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 REEP2Q9BRK0 252 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 TIPINQ9BVW5 301 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 FTHL17Q9BXU8 183 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 EIF2AQ9BY44 585 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 GCOM2Q9BZD3 368 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 MRPL44Q9H9J2 332 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 ATP6V0A4Q9HBG4 840 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 PARVGQ9HBI0 331 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 KCND1Q9NSA2 647 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms