RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 UNC45AQ9H3U1 944 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 GCNT4Q9P109 453 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 DDX3YO15523 660 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 CBX6O95503 412 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 FGGP02679 453 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 TMEM253P0C7T8 217 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 HPCAP84074 193 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 KPNB1Q14974 876 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 TAOK1Q7L7X3 1001 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 DNAAF5Q86Y56 855 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 RIBC1Q8N443 379 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 SYT2Q8N9I0 419 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 KCNN1Q92952 543 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 ZNF653Q96CK0 615 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 CENPKQ9BS16 269 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 SRP68Q9UHB9 627 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 SH3GLB1Q9Y371 365 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 ASTN1O14525 1302 aa12.33□□□□□ -0.44
SEC61A1-205ENST00000483956 POTEFA5A3E0 1075 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 FAM187AA6NFU0 413 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 CAPN9O14815 690 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 LMNAP02545 664 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 NR3C1P04150 777 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 T-ENOLP0DO92 83 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 LMNB1P20700 586 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 VARSP26640 1264 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 GALCP54803 685 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 DRG2P55039 364 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 PPATQ06203 517 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 TMED1Q13445 227 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 DHX34Q14147 1143 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 NFIXQ14938 502 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 WDR72Q3MJ13 1102 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 POTEGQ6S5H5 508 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 ZNF554Q86TJ5 538 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 SFR1Q86XK3 245 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 U2AF1L4Q8WU68 220 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 NAT14Q8WUY8 206 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 CKAP2Q8WWK9 683 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 INPP5DQ92835 1189 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 MPP4Q96JB8 637 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 ERP44Q9BS26 406 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 INIPQ9NRY2 104 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 CHKBQ9Y259 395 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 NR2E1Q9Y466 385 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 RPTORQ8N122 1335 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 SRCAPQ6ZRS2 3230 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 RASGRF2O14827 1237 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 MAGEB3O15480 346 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 RPS6KA4O75676 772 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 AKR1B1P15121 316 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 FGFR4P22455 802 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 SERPINB3P29508 390 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 COPB2P35606 906 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 STAT1P42224 750 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 KLRC3Q07444 240 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 DCAF17Q5H9S7 520 aaPredicted RBP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 DCAF12L1Q5VU92 463 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 DSTYKQ6XUX3 929 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 PTF1AQ7RTS3 328 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 CYP4X1Q8N118 509 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 SH3TC2Q8TF17 1288 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 REEP2Q9BRK0 252 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 BRD8Q9H0E9 1235 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 ZHX3Q9H4I2 956 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 CD209Q9NNX6 404 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 KCNK9Q9NPC2 374 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 TMEM98Q9Y2Y6 226 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 ATP5HO75947 161 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 VAV1P15498 845 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 PHEXP78562 749 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 DR1Q01658 176 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 MAP7Q14244 749 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 TNFAIP8L3Q5GJ75 292 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 VSTM1Q6UX27 236 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 CATSPER3Q86XQ3 398 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 ERMNQ8TAM6 284 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 FBXO25Q8TCJ0 367 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 NMD3Q96D46 503 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 ARHGEF38Q9NXL2 777 aa12.32□□□□□ -0.44
SEC61A1-205ENST00000483956 TBX3O15119 743 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 TBX10O75333 385 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 RPA1P27694 616 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 RFC4P35249 363 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 SOX5P35711 763 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 CDK7P50613 346 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 NFIL3Q16649 462 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 CCDC92Q53HC0 331 aaPredicted RBP12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 OLFML1Q6UWY5 402 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 C4orf50Q6ZRC1 276 aa12.31□□□□□ -0.44
SEC61A1-205ENST00000483956 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms