RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 FNTBP49356 437 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 MANFP55145 182 aaKnown RBP5.19□□□□□ -1.58
PTCD3-214ENST00000483925 RPL11P62913 178 aaKnown RBP5.19□□□□□ -1.58
PTCD3-214ENST00000483925 GRM1Q13255 1194 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 MOGSQ13724 837 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 MUM1Q2TAK8 710 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 CCDC157Q569K6 752 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 ZKSCAN2Q63HK3 967 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 CPZQ66K79 652 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 NLGN4XQ8N0W4 816 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 KLHDC4Q8TBB5 520 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 MAML3Q96JK9 1138 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 SAMD11Q96NU1 681 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 GORASP1Q9BQQ3 440 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 NUDT16L1Q9BRJ7 211 aaKnown RBP5.19□□□□□ -1.58
PTCD3-214ENST00000483925 C11orf84Q9BUA3 381 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-214ENST00000483925 COLEC11Q9BWP8 271 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 LSM14BQ9BX40 385 aaKnown RBP5.19□□□□□ -1.58
PTCD3-214ENST00000483925 ALDH8A1Q9H2A2 487 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-214ENST00000483925 ITM2CQ9NQX7 267 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 CLDND1Q9NY35 253 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 ARHGAP28Q9P2N2 729 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 PPARGC1AQ9UBK2 798 aaKnown RBP5.19□□□□□ -1.58
PTCD3-214ENST00000483925 EDARQ9UNE0 448 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 B3GALT1Q9Y5Z6 326 aa5.19□□□□□ -1.58
PTCD3-214ENST00000483925 LCHNA4D1U4 455 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 H7BY64 318 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 SCDO00767 359 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 SLC16A6O15403 523 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 CLASP2O75122 1294 aaKnown RBP5.18□□□□□ -1.58
PTCD3-214ENST00000483925 IL18RAPO95256 599 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 PLATP00750 562 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 C8BP07358 591 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 RPL13P26373 211 aaKnown RBP5.18□□□□□ -1.58
PTCD3-214ENST00000483925 ZXDAP98168 799 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 KIF22Q14807 665 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 INF2Q27J81 1249 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 NBPF8Q3BBV2 869 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 ZACNQ401N2 412 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 TBC1D10BQ4KMP7 808 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-214ENST00000483925 FIGNQ5HY92 759 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 ITPRIPL1Q6GPH6 555 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 SWSAP1Q6NVH7 229 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 HIBCHQ6NVY1 386 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-214ENST00000483925 ESRP1Q6NXG1 681 aaKnown RBP5.18□□□□□ -1.58
PTCD3-214ENST00000483925 APOA5Q6Q788 366 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 FASTKD5Q7L8L6 764 aaKnown RBP5.18□□□□□ -1.58
PTCD3-214ENST00000483925 FAM124AQ86V42 546 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 DCP2Q8IU60 420 aaKnown RBP5.18□□□□□ -1.58
PTCD3-214ENST00000483925 NOSTRINQ8IVI9 506 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 CACNA2D3Q8IZS8 1091 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 TTC9BQ8N6N2 239 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 RTF1Q92541 710 aaKnown RBP5.18□□□□□ -1.58
PTCD3-214ENST00000483925 DLG3Q92796 817 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 LOXL4Q96JB6 756 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 RMDN3Q96TC7 470 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 PTPN18Q99952 460 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 PLEKHA5Q9HAU0 1116 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 ZNF287Q9HBT7 754 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 WASH6PQ9NQA3 447 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 SIT1Q9Y3P8 196 aa5.18□□□□□ -1.58
PTCD3-214ENST00000483925 GOLGA6L3A6NEY3 463 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 CCDC154A6NI56 674 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 C1QTNF3-AMACRE9PGA6 284 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 APOL1O14791 398 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 PHGDHO43175 533 aaKnown RBP5.17□□□□□ -1.58
PTCD3-214ENST00000483925 HTRA2O43464 458 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-214ENST00000483925 THBS2P35442 1172 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 RAD52P43351 418 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 HSPA7P48741 367 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 FOXO1Q12778 655 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 FGL2Q14314 439 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 CDC37Q16543 378 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-214ENST00000483925 SPECC1Q5M775 1068 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 FAM26FQ5R3K3 315 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 C1QTNF12Q5T7M4 302 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 AGAP9Q5VTM2 703 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 CCDC62Q6P9F0 684 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 DSTYKQ6XUX3 929 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 ETV3LQ6ZN32 361 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 CREBRFQ8IUR6 639 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 PHYKPLQ8IUZ5 450 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 LGI4Q8N135 537 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 CCDC33Q8N5R6 958 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 KYQ8NBH2 561 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 PCYOX1LQ8NBM8 494 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 PLEKHO2Q8TD55 490 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 C16orf92Q96LL3 132 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 C8orf49Q96NF6 230 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 C1QTNF3Q9BXJ4 246 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 C22orf23Q9BZE7 217 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 AP5M1Q9H0R1 490 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 CDIP1Q9H305 208 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 UBN1Q9NPG3 1134 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 KCNH7Q9NS40 1196 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 IFT80Q9P2H3 777 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-214ENST00000483925 OGDHLQ9ULD0 1010 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 TMX2Q9Y320 296 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 NUB1Q9Y5A7 615 aa5.17□□□□□ -1.58
PTCD3-214ENST00000483925 CTDP1Q9Y5B0 961 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms