RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ZHX1Q9UKY1 873 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 EVPLQ92817 2033 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 H3BRB1 525 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 PPFIA4O75335 1185 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 TOM1L1O75674 476 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 RFX1P22670 979 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 MAPK4P31152 587 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 GTF2H1P32780 548 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 MATR3P43243 847 aaKnown RBP eCLIP9.54□□□□□ -0.884e-6■■□□□ 11.7
CDC42SE1-204ENST00000483763 CTCFP49711 727 aaPredicted RBP9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 GALCP54803 685 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 INHBEP58166 350 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 TUBB2AQ13885 445 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 CCL14Q16627 93 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 DUSP28Q4G0W2 176 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 MARCH8Q5T0T0 291 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 SLFN12LQ6IEE8 588 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 NOP9Q86U38 636 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 CEP112Q8N8E3 955 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 CEP120Q8N960 986 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 PCDHB18PQ96TA0 734 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 TUBB2BQ9BVA1 445 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 ABHD16BQ9H3Z7 469 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 TUT1Q9H6E5 874 aaKnown RBP9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 ANKZF1Q9H8Y5 726 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 OSGEPQ9NPF4 335 aa9.54□□□□□ -0.88
CDC42SE1-204ENST00000483763 INO80B-WBP1J3KQ70 363 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 MYCP01106 439 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 PRKCBP05771 671 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CHRNB2P17787 502 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 ABCB4P21439 1286 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 ABCD1P33897 745 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 DNA2P51530 1060 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CLCN6P51797 869 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 EFNA5P52803 228 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 SREBF2Q12772 1141 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 MAPK6Q16659 721 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 MORN1Q5T089 497 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 TAF3Q5VWG9 929 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 EEF1DP3Q658K8 133 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZPBP2Q6X784 338 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 TMEM130Q8N3G9 435 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 LINC01465Q8N7H1 131 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 TCP11Q8WWU5 503 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 RABGGTAQ92696 567 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 GOLGA1Q92805 767 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 ALS2CR12Q96Q35 445 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 FNBP1Q96RU3 617 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 OSBPL9Q96SU4 736 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 PNKPQ96T60 521 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 AGPAT1Q99943 283 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 TCHPQ9BT92 498 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 MRPL4Q9BYD3 311 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 PARD6BQ9BYG5 372 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 INO80BQ9C086 356 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 FZD8Q9H461 694 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 APOBEC3GQ9HC16 384 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 KIAA1586Q9HCI6 787 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 PTPRHQ9HD43 1115 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 SEPT11Q9NVA2 429 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CHORDC1Q9UHD1 332 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 NOCTQ9UK39 431 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 PPME1Q9Y570 386 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 SIP14410 1827 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CTAGE15A4D2H0 777 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 GAS2O43903 313 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CST3P01034 146 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 VTNP04004 478 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 MMP3P08254 477 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 H2AFZP0C0S5 128 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CTAGE8P0CG41 777 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 PROZP22891 400 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 ANXA13P27216 316 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CTGFP29279 349 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CYP2C19P33261 490 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 TM4SF4P48230 202 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 PTENP60484 403 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 MBTD1Q05BQ5 628 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CRHR2Q13324 411 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 C10orf76Q5T2E6 689 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 H2AFVQ71UI9 128 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CTAGE6Q86UF2 777 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 VPS36Q86VN1 386 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 CTAGE4Q8IX94 777 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 TMEM192Q8IY95 271 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 LRRC57Q8N9N7 239 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 ARHGEF26Q96DR7 871 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 MS4A14Q96JA4 679 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 THAP2Q9H0W7 228 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZFYVE28Q9HCC9 887 aa9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 LUC7LQ9NQ29 371 aaKnown RBP9.53□□□□□ -0.88
CDC42SE1-204ENST00000483763 A0A087WZ62 844 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 SLC15A5A6NIM6 579 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 BTNL10A8MVZ5 291 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 ACKR2O00590 384 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 HLA-DRAP01903 254 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 MMEP08473 750 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 RHOXF2BP0C7M4 288 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 CYP11B1P15538 503 aa9.52□□□□□ -0.88
CDC42SE1-204ENST00000483763 TNFAIP3P21580 790 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms