RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TMEM132AQ24JP5 1023 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 ZACNQ401N2 412 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 UBXN11Q5T124 520 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 TDRD10Q5VZ19 366 aaKnown RBP10.94□□□□□ -0.66
HDAC6-226ENST00000483656 PHLDB3Q6NSJ2 640 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 CACNA2D4Q7Z3S7 1137 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 FAM228AQ86W67 206 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 TMTC1Q8IUR5 882 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 GPIHBP1Q8IV16 184 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 ARHGEF19Q8IW93 802 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 ARRDC4Q8NCT1 418 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 ZNF397Q8NF99 534 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-226ENST00000483656 VTI1AQ96AJ9 217 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 GLT1D1Q96MS3 346 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 GPR88Q9GZN0 384 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 SENP6Q9GZR1 1112 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-226ENST00000483656 KCND1Q9NSA2 647 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 TRMT13Q9NUP7 481 aaKnown RBP10.94□□□□□ -0.66
HDAC6-226ENST00000483656 NOC2LQ9Y3T9 749 aaKnown RBP10.94□□□□□ -0.66
HDAC6-226ENST00000483656 CENPFP49454 3210 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 USP27XA6NNY8 438 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 NPTXRO95502 500 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 MYCP01106 439 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-226ENST00000483656 CLTAP09496 248 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 CXCL8P10145 99 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 TNNI1P19237 187 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 MSNP26038 577 aaKnown RBP10.93□□□□□ -0.66
HDAC6-226ENST00000483656 GRM5P41594 1212 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 CDK17Q00537 523 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 POU5F1Q01860 360 aaKnown RBP10.93□□□□□ -0.66
HDAC6-226ENST00000483656 PTK7Q13308 1070 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 SLC10A6Q3KNW5 377 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 FAM26DQ5JW98 314 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 HGSNATQ68CP4 663 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 CYP26C1Q6V0L0 522 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 TOGARAM2Q6ZUX3 1019 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 USP37Q86T82 979 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 EFCAB13Q8IY85 973 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 SYN2Q92777 582 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-226ENST00000483656 ELMO3Q96BJ8 720 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 DEFB118Q96PH6 123 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 FNBP1Q96RU3 617 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 EIF2AQ9BY44 585 aaKnown RBP10.93□□□□□ -0.66
HDAC6-226ENST00000483656 TRPV6Q9H1D0 765 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 SPTLC3Q9NUV7 552 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 RAB20Q9NX57 234 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 AIPL1Q9NZN9 384 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 ARHGAP20Q9P2F6 1191 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 APEX2Q9UBZ4 518 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 DNAJC12Q9UKB3 198 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 OGDHLQ9ULD0 1010 aa10.93□□□□□ -0.66
HDAC6-226ENST00000483656 LACTBL1A8MY62 500 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 ARVCFO00192 962 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 TULP1O00294 542 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-226ENST00000483656 B4GALT4O60513 344 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 HLA-DRAP01903 254 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 PLEKP08567 350 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-226ENST00000483656 CTSHP09668 335 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 PNMA6AP0CW24 399 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-226ENST00000483656 AXLP30530 894 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 MNX1P50219 401 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-226ENST00000483656 CDK7P50613 346 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 CETN1Q12798 172 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 SURF1Q15526 300 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 DCAF4L1Q3SXM0 396 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 SFMBT2Q5VUG0 894 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 NOTUMQ6P988 496 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 SLC27A1Q6PCB7 646 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 TRAF7Q6Q0C0 670 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 IRF2BP2Q7Z5L9 587 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 CTU1Q7Z7A3 348 aaKnown RBP10.92□□□□□ -0.66
HDAC6-226ENST00000483656 RSPH3Q86UC2 560 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 WDR49Q8IV35 697 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 CCAR2Q8N163 923 aaKnown RBP10.92□□□□□ -0.66
HDAC6-226ENST00000483656 TMEM130Q8N3G9 435 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 FBXL13Q8NEE6 735 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 HELQQ8TDG4 1101 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 KAT5Q92993 513 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 TATDN2Q93075 761 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 FAM212AQ96EL1 285 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 KREMEN1Q96MU8 473 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 PI4K2AQ9BTU6 479 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 STK33Q9BYT3 514 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 CXCL16Q9H2A7 254 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 AGO3Q9H9G7 860 aaKnown RBP10.92□□□□□ -0.66
HDAC6-226ENST00000483656 RPF1Q9H9Y2 349 aaKnown RBP10.92□□□□□ -0.66
HDAC6-226ENST00000483656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.92□□□□□ -0.661e-15■■■■■ 67.3
HDAC6-226ENST00000483656 STARD7Q9NQZ5 370 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 MYO6Q9UM54 1294 aa10.92□□□□□ -0.66
HDAC6-226ENST00000483656 REXO2Q9Y3B8 237 aaKnown RBP10.92□□□□□ -0.66
HDAC6-226ENST00000483656 ANK1P16157 1881 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 MROH7Q68CQ1 1323 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 A0A0U1RQG5 324 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 KBTBD13C9JR72 458 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 DNM1LO00429 736 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 NRDCO43847 1150 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 IL18RAPO95256 599 aa10.91□□□□□ -0.66
HDAC6-226ENST00000483656 CST3P01034 146 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-226ENST00000483656 RPLP2P05387 115 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms