RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 COQ10AQ96MF6 247 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 TTC1Q99614 292 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 QRSL1Q9H0R6 528 aaKnown RBP4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 R3HDMLQ9H3Y0 253 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 VTA1Q9NP79 307 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 ATP11BQ9Y2G3 1177 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 MASP2O00187 686 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 PJA2O43164 708 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 ZEB2O60315 1214 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 CDKL5O76039 1030 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 CFIP05156 583 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 SNRPA1P09661 255 aaKnown RBP4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 ITGAMP11215 1152 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 ALOX15P16050 662 aaPredicted RBP4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 MRPS21P82921 87 aaKnown RBP4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 ABHD17BQ5VST6 288 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 TSHZ3Q63HK5 1081 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 DDX46Q7L014 1031 aaKnown RBP4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 THNSL2Q86YJ6 484 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 SLC44A3Q8N4M1 653 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 GPR156Q8NFN8 814 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 AUTS2Q8WXX7 1259 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 ZSWIM1Q9BR11 485 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 BCO1Q9HAY6 547 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 DMRT3Q9NQL9 472 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 KLHL11Q9NVR0 708 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 RNF181Q9P0P0 153 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 ATRNL1Q5VV63 1379 aa4.39□□□□□ -1.71
LAPTM4A-202ENST00000483117 COL11A2P13942 1736 aaPredicted RBP4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 CCDC78A2IDD5 438 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 GOLGA8AA7E2F4 631 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 RAP2AP10114 183 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 ECHS1P30084 290 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 CXCR5P32302 372 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 SREBF1P36956 1147 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 SCAND1P57086 179 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 C21orf58P58505 322 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 MRPS9P82933 396 aaKnown RBP4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 SCAPQ12770 1279 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 ADRM1Q16186 407 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 MUM1Q2TAK8 710 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 PRR16Q569H4 304 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 AFMIDQ63HM1 303 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 B3GNTL1Q67FW5 361 aaPredicted RBP4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 FBXO42Q6P3S6 717 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 RD3Q7Z3Z2 195 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 GPR149Q86SP6 731 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 MAPKAPK5Q8IW41 473 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 RHOT2Q8IXI1 618 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 TMEM132CQ8N3T6 1108 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 LMBR1Q8WVP7 490 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 STON2Q8WXE9 905 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 UHRF1Q96T88 793 aaPredicted RBP4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 MRI1Q9BV20 369 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 LDAHQ9H6V9 325 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 IFT122Q9HBG6 1241 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 SCOCQ9UIL1 159 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 APOBEC2Q9Y235 224 aaKnown RBP4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 SALL3Q9BXA9 1300 aa4.38□□□□□ -1.71
LAPTM4A-202ENST00000483117 ESRRBO95718 433 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 FOSP01100 380 aaPredicted RBP4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 ZNF37AP17032 561 aaPredicted RBP4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 MPLP40238 635 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 ATXN1P54253 815 aaKnown RBP4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 PER3P56645 1201 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 OCA2Q04671 838 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 SP140Q13342 867 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 RRP12Q5JTH9 1297 aaKnown RBP4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 TOR2AQ5JU69 321 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 SYCE2Q6PIF2 218 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 KCNK18Q7Z418 384 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 PQLC1Q8N2U9 271 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 SIMC1Q8NDZ2 872 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 FATE1Q969F0 183 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 ALOXE3Q9BYJ1 711 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 RSAD1Q9HA92 442 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 TESQ9UGI8 421 aaKnown RBP4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 TBX22Q9Y458 520 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 COX11Q9Y6N1 276 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 SPATA31A6Q5VVP1 1343 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 AATKQ6ZMQ8 1374 aa4.37□□□□□ -1.71
LAPTM4A-202ENST00000483117 PRSS23O95084 383 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 FPR1P21462 350 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 SLC6A2P23975 617 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 ALDH1A3P47895 512 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 MXRA7P84157 204 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 PPP3CAQ08209 521 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 MPP3Q13368 585 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 SPDYE7PQ495Y7 208 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 HOXB13Q92826 284 aaPredicted RBP4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 RNF31Q96EP0 1072 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 FUBP3Q96I24 572 aaKnown RBP eCLIP4.36□□□□□ -1.714e-6■□□□□ 9.6
LAPTM4A-202ENST00000483117 Q96MF0 132 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 ACE2Q9BYF1 805 aaPredicted RBP4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 GREM2Q9H772 168 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 ALG13Q9NP73 1137 aaKnown RBP4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 ADARB2Q9NS39 739 aaKnown RBP4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 RBM12Q9NTZ6 932 aaKnown RBP4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 SIK3Q9Y2K2 1263 aa4.36□□□□□ -1.71
LAPTM4A-202ENST00000483117 INSL6Q9Y581 213 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms