RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MTMR9Q96QG7 549 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 TMPRSS13Q9BYE2 586 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 NT5C3AQ9H0P0 336 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 AASDHPPTQ9NRN7 309 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 SAMSN1Q9NSI8 373 aaKnown RBP8.5□□□□□ -1.05
SNX13-208ENST00000482558 EXOC1Q9NV70 894 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 MYO1AQ9UBC5 1043 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 LRWD1Q9UFC0 647 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 RGS17Q9UGC6 210 aaPredicted RBP8.5□□□□□ -1.05
SNX13-208ENST00000482558 SAMM50Q9Y512 469 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 PPP2R3BQ9Y5P8 575 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 KDM3AQ9Y4C1 1321 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 ATRNL1Q5VV63 1379 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 KCNJ18B7U540 433 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 PAGE1O75459 146 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 RFPL3O75679 317 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 TCEA3O75764 348 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 GOLGA8HP0CJ92 632 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 AKR1B1P15121 316 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 VEGFAP15692 232 aaPredicted RBP8.49□□□□□ -1.05
SNX13-208ENST00000482558 LMNB1P20700 586 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 RXRBP28702 533 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 DNM2P50570 870 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 C19orf57Q0VDD7 668 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 KCNJ12Q14500 433 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 KARSQ15046 597 aaKnown RBP8.49□□□□□ -1.05
SNX13-208ENST00000482558 ZNF827Q17R98 1081 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 SLC35G1Q2M3R5 365 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 SLC4A8Q2Y0W8 1093 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 CERKLQ49MI3 558 aaPredicted RBP8.49□□□□□ -1.05
SNX13-208ENST00000482558 KLHL10Q6JEL2 608 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 TATDN1Q6P1N9 297 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 PAOXQ6QHF9 649 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 APTXQ7Z2E3 356 aaKnown RBP8.49□□□□□ -1.05
SNX13-208ENST00000482558 SLFN12Q8IYM2 578 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 ADGRF4Q8IZF3 695 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 CERS5Q8N5B7 392 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 TC2NQ8N9U0 490 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 GOLM1Q8NBJ4 401 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 PHC3Q8NDX5 983 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNX13-208ENST00000482558 FERD3LQ96RJ6 166 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 SMAD5Q99717 465 aaKnown RBP8.49□□□□□ -1.05
SNX13-208ENST00000482558 JMJD4Q9H9V9 463 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 CYP4F12Q9HCS2 524 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 INTS13Q9NVM9 706 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 TRMT1Q9NXH9 659 aaKnown RBP8.49□□□□□ -1.05
SNX13-208ENST00000482558 TMOD2Q9NZR1 351 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 HERC5Q9UII4 1024 aaKnown RBP8.49□□□□□ -1.05
SNX13-208ENST00000482558 CTNND2Q9UQB3 1225 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 PPP2R2CQ9Y2T4 447 aa8.49□□□□□ -1.05
SNX13-208ENST00000482558 GREB1LQ9C091 1923 aaPredicted RBP8.48□□□□□ -1.05
SNX13-208ENST00000482558 BAZ2BQ9UIF8 2168 aaKnown RBP8.48□□□□□ -1.05
SNX13-208ENST00000482558 CYP3A7-CYP3A51PA0A087WV96 503 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 FAM95CA0A1B0GW59 222 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 MPHOSPH10O00566 681 aaKnown RBP8.48□□□□□ -1.05
SNX13-208ENST00000482558 ECE2O60344 883 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 MFAP3LO75121 409 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 CYP3A7P24462 503 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 CCNE1P24864 410 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 SLC1A4P43007 532 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 COPB1P53618 953 aaKnown RBP8.48□□□□□ -1.05
SNX13-208ENST00000482558 PABPC4Q13310 644 aaKnown RBP eCLIP8.48□□□□□ -1.05
SNX13-208ENST00000482558 KRT31Q15323 416 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 CCDC96Q2M329 555 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 ZC3H12BQ5HYM0 836 aaKnown RBP8.48□□□□□ -1.05
SNX13-208ENST00000482558 DACT2Q5SW24 774 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 FAM83BQ5T0W9 1011 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 FKBP1CQ5VVH2 108 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 FBXW10Q5XX13 1052 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 ERAP2Q6P179 960 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 CYP26C1Q6V0L0 522 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 RINLQ6ZS11 566 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 UNC13DQ70J99 1090 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 TMEM139Q8IV31 216 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 SULF2Q8IWU5 870 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 RTKN2Q8IZC4 609 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 CPXCR1Q8N123 301 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 TXLNBQ8N3L3 684 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 HOOK2Q96ED9 719 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 TRIM9Q9C026 710 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 TMEM60Q9H2L4 133 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 SOX17Q9H6I2 414 aaPredicted RBP8.48□□□□□ -1.05
SNX13-208ENST00000482558 PSTPIP2Q9H939 334 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 VAT1LQ9HCJ6 419 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 DDX4Q9NQI0 724 aaKnown RBP8.48□□□□□ -1.05
SNX13-208ENST00000482558 ZNHIT6Q9NWK9 470 aaKnown RBP8.48□□□□□ -1.05
SNX13-208ENST00000482558 STK32BQ9NY57 414 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 DNAI1Q9UI46 699 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 HDAC9Q9UKV0 1011 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 DAAM1Q9Y4D1 1078 aa8.48□□□□□ -1.05
SNX13-208ENST00000482558 USP27XA6NNY8 438 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 LGALS16A8MUM7 142 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 TMEM232C9JQI7 657 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 F8W031 263 aaPredicted RBP8.47□□□□□ -1.05
SNX13-208ENST00000482558 CYP26A1O43174 497 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 KLRC4O43908 158 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 KIF5CO60282 957 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 PF4P02776 101 aa8.47□□□□□ -1.05
SNX13-208ENST00000482558 PLCG1P19174 1290 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms