RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 ADPGKQ9BRR6 497 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 HERC2P3Q9BVR0 1158 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 S1PR5Q9H228 398 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 NGRNQ9NPE2 291 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 KCND2Q9NZV8 630 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 ODF2LQ9ULJ1 636 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 TBX20Q9UMR3 447 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 HCFC2Q9Y5Z7 792 aa12.5□□□□□ -0.41
RAPGEF1-207ENST00000481260 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 SMIM28A0A1B0GU29 152 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 TNFRSF10AO00220 468 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 ADAM12O43184 909 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 TRAK2O60296 914 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 TBCAO75347 108 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 CXCL8P10145 99 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 MCF2P10911 925 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 CLCNKBP51801 687 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 GUCY2FP51841 1108 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 STRN3Q13033 797 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 TUSC3Q13454 348 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 XKR4Q5GH76 650 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 RTP2Q5QGT7 225 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 KIAA0319Q5VV43 1072 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 SCARA3Q6AZY7 606 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 ANKRD54Q6NXT1 300 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 FUT10Q6P4F1 479 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 PRSS55Q6UWB4 352 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 GLYCTKQ8IVS8 523 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 FAM178BQ8IXR5 827 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 HACE1Q8IYU2 909 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 KCTD17Q8N5Z5 321 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 SMRP1Q8NCR6 262 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 KLHL5Q96PQ7 755 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 TCHPQ9BT92 498 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 STK17AQ9UEE5 414 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 TUBGCP4Q9UGJ1 667 aa12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 USP15Q9Y4E8 981 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 TDRD15B5MCY1 1934 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-207ENST00000481260 TEX28O15482 410 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 CUTAO60888 179 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 TOM1L1O75674 476 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 PPP1R37O75864 691 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 SOD2P04179 222 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 THP07101 528 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 SPATA31D3P0C874 917 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 SP100P23497 879 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 SMTNP53814 917 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 WNT7BP56706 349 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 ZP2Q05996 745 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 MCL1Q07820 350 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 COASYQ13057 564 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 SMAD4Q13485 552 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 NOLC1Q14978 699 aaKnown RBP eCLIP12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 SMAD2Q15796 467 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 PDE12Q6L8Q7 609 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 TMEM184AQ6ZMB5 413 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 SPATA31D4Q6ZUB0 917 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 SV2BQ7L1I2 683 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 BICD1Q96G01 975 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 STRA6Q9BX79 667 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 GDPD2Q9HCC8 539 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 CHST7Q9NS84 486 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 LARSQ9P2J5 1176 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 RCOR1Q9UKL0 485 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 ADAM28Q9UKQ2 775 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 MYH11P35749 1972 aa12.48□□□□□ -0.41
RAPGEF1-207ENST00000481260 TRIP11Q15643 1979 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 ZMYM2Q9UBW7 1377 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 FRMD3A2A2Y4 597 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 PPEF2O14830 753 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 NCK2O43639 380 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 PIGRP01833 764 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 BRCC3P46736 316 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 ME1P48163 572 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 GTF2BQ00403 316 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 ENOX2Q16206 610 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 RARS2Q5T160 578 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 RESP18Q5W5W9 173 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 RSPO2Q6UXX9 243 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 ZPBP2Q6X784 338 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 CCDC73Q6ZRK6 1079 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 ZNF720Q7Z2F6 126 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 MAP4K3Q8IVH8 894 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 LEO1Q8WVC0 666 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 RIN2Q8WYP3 895 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 RSPH1Q8WYR4 309 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 SUSD6Q92537 303 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 ACAP3Q96P50 834 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 CDCA3Q99618 268 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 CCDC94Q9BW85 323 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 COLEC11Q9BWP8 271 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 BLZF1Q9H2G9 400 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 IRAK3Q9Y616 596 aa12.47□□□□□ -0.41
RAPGEF1-207ENST00000481260 A0A0B4J269 797 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 LACTBL1A8MY62 500 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms