RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 ANKRD54Q6NXT1 300 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 FUT10Q6P4F1 479 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 TMEM184AQ6ZMB5 413 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 SFR1Q86XK3 245 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 SMRP1Q8NCR6 262 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 HASPINQ8TF76 798 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 KCNN1Q92952 543 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 SSX2IPQ9Y2D8 614 aa22.04■■□□□ 1.12
VPS36-204ENST00000480923 SMIM28A0A1B0GU29 152 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 IDEP14735 1019 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 KLRC2P26717 231 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 ABCD1P33897 745 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 MCL1Q07820 350 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 SEZ6Q53EL9 994 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 SHC4Q6S5L8 630 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 RNF168Q8IYW5 571 aaPredicted RBP22.03■■□□□ 1.12
VPS36-204ENST00000480923 SNX27Q96L92 541 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 KLHL5Q96PQ7 755 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 PPP1R10Q96QC0 940 aaKnown RBP22.03■■□□□ 1.12
VPS36-204ENST00000480923 FIZ1Q96SL8 496 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 APOL5Q9BWW9 433 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 GPR62Q9BZJ7 368 aa22.03■■□□□ 1.12
VPS36-204ENST00000480923 KIF4AO95239 1232 aa22.02■■□□□ 1.12
VPS36-204ENST00000480923 EFEMP2O95967 443 aa22.02■■□□□ 1.12
VPS36-204ENST00000480923 CNPP09543 421 aaKnown RBP22.02■■□□□ 1.12
VPS36-204ENST00000480923 SSTR3P32745 418 aaPredicted RBP22.02■■□□□ 1.12
VPS36-204ENST00000480923 GTF2BQ00403 316 aa22.02■■□□□ 1.12
VPS36-204ENST00000480923 ZC2HC1CQ53FD0 456 aaPredicted RBP22.02■■□□□ 1.12
VPS36-204ENST00000480923 AXDND1Q5T1B0 1012 aaPredicted RBP22.02■■□□□ 1.12
VPS36-204ENST00000480923 PPFIBP1Q86W92 1011 aa22.02■■□□□ 1.12
VPS36-204ENST00000480923 DNAJC19Q96DA6 116 aa22.02■■□□□ 1.12
VPS36-204ENST00000480923 B3GALT6Q96L58 329 aa22.02■■□□□ 1.12
VPS36-204ENST00000480923 USP15Q9Y4E8 981 aaPredicted RBP22.02■■□□□ 1.12
VPS36-204ENST00000480923 SF3B1O75533 1304 aaKnown RBP eCLIP22.02■■□□□ 1.12
VPS36-204ENST00000480923 TDRD15B5MCY1 1934 aaKnown RBP22.02■■□□□ 1.11
VPS36-204ENST00000480923 MYH15Q9Y2K3 1946 aa22.02■■□□□ 1.11
VPS36-204ENST00000480923 LILRB3O75022 631 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 PIGRP01833 764 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 EPCAMP16422 314 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 HOXB8P17481 243 aaPredicted RBP22.01■■□□□ 1.11
VPS36-204ENST00000480923 GAP43P17677 238 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 USP41Q3LFD5 358 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 TPRNQ4KMQ1 711 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 XKR4Q5GH76 650 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 KIAA0319Q5VV43 1072 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 SYCE2Q6PIF2 218 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 ALKAL1Q6UXT8 129 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 MAP4K3Q8IVH8 894 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 STAMQ92783 540 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 DHX58Q96C10 678 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 HAPLN2Q9GZV7 340 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 MRPL44Q9H9J2 332 aaKnown RBP22.01■■□□□ 1.11
VPS36-204ENST00000480923 GOLGA2P5Q9HBQ8 144 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 SLC38A7Q9NVC3 462 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 SEL1LQ9UBV2 794 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 PRKAG3Q9UGI9 489 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 PCDHA7Q9UN72 937 aa22.01■■□□□ 1.11
VPS36-204ENST00000480923 MYH11P35749 1972 aa22■■□□□ 1.11
VPS36-204ENST00000480923 DSG1Q02413 1049 aa22■■□□□ 1.11
VPS36-204ENST00000480923 HERC4Q5GLZ8 1057 aaPredicted RBP22■■□□□ 1.11
VPS36-204ENST00000480923 ZNF720Q7Z2F6 126 aa22■■□□□ 1.11
VPS36-204ENST00000480923 ADHFE1Q8IWW8 467 aa22■■□□□ 1.11
VPS36-204ENST00000480923 GJD3Q8N144 294 aa22■■□□□ 1.11
VPS36-204ENST00000480923 IQUBQ8NA54 791 aa22■■□□□ 1.11
VPS36-204ENST00000480923 SLC22A17Q8WUG5 538 aa22■■□□□ 1.11
VPS36-204ENST00000480923 UROC1Q96N76 676 aa22■■□□□ 1.11
VPS36-204ENST00000480923 LRRC27Q9C0I9 530 aa22■■□□□ 1.11
VPS36-204ENST00000480923 CUEDC2Q9H467 287 aa22■■□□□ 1.11
VPS36-204ENST00000480923 ST6GALNAC4Q9H4F1 302 aa22■■□□□ 1.11
VPS36-204ENST00000480923 CHST7Q9NS84 486 aa22■■□□□ 1.11
VPS36-204ENST00000480923 FAM13BQ9NYF5 915 aa22■■□□□ 1.11
VPS36-204ENST00000480923 TBC1D7Q9P0N9 293 aa22■■□□□ 1.11
VPS36-204ENST00000480923 CNTN3Q9P232 1028 aa22■■□□□ 1.11
VPS36-204ENST00000480923 RCOR1Q9UKL0 485 aa22■■□□□ 1.11
VPS36-204ENST00000480923 ZDHHC9Q9Y397 364 aa22■■□□□ 1.11
VPS36-204ENST00000480923 SPDYE4A6NLX3 237 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 CLTAP09496 248 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 KCNE1P15382 129 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 CLCNKBP51801 687 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 ZP2Q05996 745 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 E2F4Q16254 413 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 RIN2Q8WYP3 895 aaPredicted RBP21.99■■□□□ 1.11
VPS36-204ENST00000480923 ZMAT2Q96NC0 199 aaKnown RBP21.99■■□□□ 1.11
VPS36-204ENST00000480923 MSTO1Q9BUK6 570 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 S1PR5Q9H228 398 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 TNMDQ9H2S6 317 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 CD320Q9NPF0 282 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 PANK4Q9NVE7 773 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 DZANK1Q9NVP4 752 aa21.99■■□□□ 1.11
VPS36-204ENST00000480923 CUL9Q8IWT3 2517 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 TEX28O15482 410 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 B3GAT3O94766 335 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 ADH1AP07327 375 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 CXCL8P10145 99 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 CLCN4P51793 760 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 SOX4Q06945 474 aaPredicted RBP21.98■■□□□ 1.11
VPS36-204ENST00000480923 ELAVL2Q12926 359 aaKnown RBP21.98■■□□□ 1.11
VPS36-204ENST00000480923 KYAT1Q16773 422 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 SLC10A6Q3KNW5 377 aa21.98■■□□□ 1.11
VPS36-204ENST00000480923 FAM171A1Q5VUB5 890 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 238.5 ms