RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 A0A087WWV3 80 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 VPS37CA5D8V6 355 aaPredicted RBP12.54□□□□□ -0.4
CCM2-213ENST00000480658 FAM86C2PA6NEL3 165 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 TMEM221A6NGB7 291 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 M0R296 226 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 CLDN3O15551 220 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 TBCAO75347 108 aaKnown RBP12.54□□□□□ -0.4
CCM2-213ENST00000480658 KRT18P05783 430 aaKnown RBP12.54□□□□□ -0.4
CCM2-213ENST00000480658 POU2F2P09086 479 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 HNRNPA1P09651 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCM2-213ENST00000480658 PROZP22891 400 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 RPL9P32969 192 aaKnown RBP12.54□□□□□ -0.4
CCM2-213ENST00000480658 SLC12A3P55017 1021 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 IL17AQ16552 155 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 TMEM119Q4V9L6 283 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
CCM2-213ENST00000480658 PPP1R10Q96QC0 940 aaKnown RBP12.54□□□□□ -0.4
CCM2-213ENST00000480658 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
CCM2-213ENST00000480658 KIFC3Q9BVG8 833 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 RUSC1Q9BVN2 902 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 OXCT2Q9BYC2 517 aaPredicted RBP12.54□□□□□ -0.4
CCM2-213ENST00000480658 PLEKHA5Q9HAU0 1116 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 PARVGQ9HBI0 331 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 MIOSQ9NXC5 875 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 IGSF9Q9P2J2 1179 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 STK17AQ9UEE5 414 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 GDAQ9Y2T3 454 aa12.54□□□□□ -0.4
CCM2-213ENST00000480658 ARHGEF37A1IGU5 675 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 CASTOR2A6NHX0 329 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 PP2D1A8MPX8 630 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 PTGESO14684 152 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 XYLBO75191 536 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 B3GAT3O94766 335 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 KIF4AO95239 1232 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
CCM2-213ENST00000480658 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
CCM2-213ENST00000480658 KCNE1P15382 129 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 PSMD5Q16401 504 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 UPP1Q16831 310 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 UVSSAQ2YD98 709 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 XKR4Q5GH76 650 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 NT5DC1Q5TFE4 455 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 FAM171A1Q5VUB5 890 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 TMC5Q6UXY8 1006 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 TMEM161BQ8NDZ6 487 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 LARP4BQ92615 738 aaKnown RBP12.53□□□□□ -0.4
CCM2-213ENST00000480658 PBXIP1Q96AQ6 731 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 BICD1Q96G01 975 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 APOL5Q9BWW9 433 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 GPR62Q9BZJ7 368 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 CCSER1Q9C0I3 900 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 CDT1Q9H211 546 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 PIDD1Q9HB75 910 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 PTPRHQ9HD43 1115 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 WDR6Q9NNW5 1121 aaKnown RBP12.53□□□□□ -0.4
CCM2-213ENST00000480658 CNTN3Q9P232 1028 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 MAFFQ9ULX9 164 aa12.53□□□□□ -0.4
CCM2-213ENST00000480658 SMIM28A0A1B0GU29 152 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 CCDC195A0A1B0GUA6 201 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 C2CD4DB7Z1M9 353 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 HNRNPDLO14979 420 aaKnown RBP12.52□□□□□ -0.41
CCM2-213ENST00000480658 SYN3O14994 580 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 SLC16A4O15374 487 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 FAM13AO94988 1023 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 CDC25AP30304 524 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 MATR3P43243 847 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCM2-213ENST00000480658 LIG4P49917 911 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 MCL1Q07820 350 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 MAPK7Q13164 816 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 SF3A1Q15459 793 aaKnown RBP12.52□□□□□ -0.41
CCM2-213ENST00000480658 HFE2Q6ZVN8 426 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 CD302Q8IX05 232 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 DAW1Q8N136 415 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 FBXL6Q8N531 539 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
CCM2-213ENST00000480658 KREMEN2Q8NCW0 462 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 HVCN1Q96D96 273 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 SNX27Q96L92 541 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 ANKFY1Q9P2R3 1169 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 SEL1LQ9UBV2 794 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 NUB1Q9Y5A7 615 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 BACE2Q9Y5Z0 518 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 CLUHO75153 1309 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 MYO7AQ13402 2215 aa12.52□□□□□ -0.41
CCM2-213ENST00000480658 DENND4AQ7Z401 1863 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 H7C4K7 107 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 K7ELQ4 463 aaPredicted RBP12.51□□□□□ -0.41
CCM2-213ENST00000480658 TGM5O43548 720 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 ZMYND10O75800 440 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 CLTAP09496 248 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 ZNF131P52739 623 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 POU5F1Q01860 360 aaKnown RBP12.51□□□□□ -0.41
CCM2-213ENST00000480658 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 NAB2Q15742 525 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 RTP2Q5QGT7 225 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
CCM2-213ENST00000480658 ALKAL1Q6UXT8 129 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms