RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 NPHP3-ACAD11A0A0J9YXS1 232 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 PALM3A6NDB9 673 aaPredicted RBP9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 GSTA2P09210 222 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 FAM200BP0CF97 657 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 GNA11P29992 359 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 VHLP40337 213 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 TRAPPC10P48553 1259 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 GRM1Q13255 1194 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 RCN1Q15293 331 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 ECM1Q16610 540 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 CENPPQ6IPU0 288 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 PPP1R18Q6NYC8 613 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 AGGF1Q8N302 714 aaeCLIP9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 GLIS3Q8NEA6 775 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 TPCN2Q8NHX9 752 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 FAM136AQ96C01 138 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 DYDC2Q96IM9 177 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 NAP1L3Q99457 506 aaPredicted RBP9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 PITPNM3Q9BZ71 974 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 CTNNAL1Q9UBT7 734 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 ZNRF3Q9ULT6 936 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 PHF24Q9UPV7 400 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 POLR2AP24928 1970 aaKnown RBP9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 CNTNAP5Q8WYK1 1306 aa9.04□□□□□ -0.96
SNRNP200-203ENST00000480242 HNRNPRO43390 633 aaKnown RBP9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 FGFR1OPO95684 399 aaKnown RBP9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 KLRC3Q07444 240 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 GRM4Q14833 912 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 NONOQ15233 471 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 CNPY1Q3B7I2 92 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 KHDC1Q4VXA5 237 aaKnown RBP9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 KIAA1755Q5JYT7 1200 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 ALKBH5Q6P6C2 394 aaKnown RBP9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 ZNF365Q70YC5 407 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 IFT43Q96FT9 208 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 PSTPIP2Q9H939 334 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 ERVK-5Q9HDB9 667 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 ZDHHC18Q9NUE0 388 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 RPTORQ8N122 1335 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 BHMG1C9JSJ3 638 aaPredicted RBP9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 CES2O00748 559 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 TJP3O95049 919 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 TTLL1O95922 423 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 GALNT17Q6IS24 598 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 CGB2Q6NT52 195 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 JAMLQ86YT9 394 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 LRRC57Q8N9N7 239 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 MIPOL1Q8TD10 442 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 LRRC37BQ96QE4 947 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 SPZ1Q9BXG8 430 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 LRMDAQ9H2I8 198 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 DNAJC17Q9NVM6 304 aaKnown RBP9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 MTRF1LQ9UGC7 380 aaKnown RBP9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 SPATA31D3P0C874 917 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 ACTN1P12814 892 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 BRAFP15056 766 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 DESP17661 470 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 PARP6Q2NL67 630 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 PRR16Q569H4 304 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 DUPD1Q68J44 220 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 RFWD3Q6PCD5 774 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 NSMFQ6X4W1 530 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 SPATA31D4Q6ZUB0 917 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 LCA5Q86VQ0 697 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 CDAN1Q8IWY9 1227 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 ABTB1Q969K4 478 aaPredicted RBP9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 GMCL1Q96IK5 515 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 RIOX1Q9H6W3 641 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 DCLRE1BQ9H816 532 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.03□□□□□ -0.963e-10■■■■■ 157.3
SNRNP200-203ENST00000480242 PRKAG3Q9UGI9 489 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 CHMP2BQ9UQN3 213 aa9.03□□□□□ -0.96
SNRNP200-203ENST00000480242 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 MAGEA13PA6NCF6 341 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 MEIS1O00470 390 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 KRT36O76013 467 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 ADCY7P51828 1080 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 MPP2Q14168 576 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 PABPC1LQ4VXU2 614 aaKnown RBP9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 SH3D19Q5HYK7 790 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 ZDHHC24Q6UX98 284 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 RFX8Q6ZV50 586 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 ZNF571Q7Z3V5 609 aaPredicted RBP9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 PPFIBP2Q8ND30 876 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 TMEM174Q8WUU8 243 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 CKAP2Q8WWK9 683 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 SEC14L1Q92503 715 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 CALML4Q96GE6 196 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 HIC2Q96JB3 615 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 TSG101Q99816 390 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 SH2D3AQ9BRG2 576 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 RMI1Q9H9A7 625 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 PI4KBQ9UBF8 816 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 ARMCX3Q9UH62 379 aaPredicted RBP9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 AMFRQ9UKV5 643 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 PTPN22Q9Y2R2 807 aa9.02□□□□□ -0.96
SNRNP200-203ENST00000480242 POTEMA6NI47 508 aa9.02□□□□□ -0.97
SNRNP200-203ENST00000480242 CAPN9O14815 690 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms