RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 TSPY26PQ9H489 355 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 INPP5FQ9Y2H2 1132 aa12.17□□□□□ -0.46
CLDN11-205ENST00000480067 BECN2A8MW95 431 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 OFD1O75665 1012 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 DGKIO75912 1065 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 IL18RAPO95256 599 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 GJB5O95377 273 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 GNA14O95837 355 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 MYL5Q02045 173 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 NOMO2Q5JPE7 1267 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 CLLU1OSQ5K130 101 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 ALKAL1Q6UXT8 129 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 LRRC55Q6ZSA7 311 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 USP37Q86T82 979 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 CREBRFQ8IUR6 639 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 HERC6Q8IVU3 1022 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 CD302Q8IX05 232 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 ZC3H3Q8IXZ2 948 aaKnown RBP12.16□□□□□ -0.46
CLDN11-205ENST00000480067 TDHQ8IZJ6 230 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 URGCPQ8TCY9 931 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 RSPH1Q8WYR4 309 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 CCDC127Q96BQ5 260 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 ZFP42Q96MM3 310 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 BPIFA3Q9BQP9 254 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 MKNK1Q9BUB5 465 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 TMEM117Q9H0C3 514 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 ASB7Q9H672 318 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 KANSL3Q9P2N6 904 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 NFE2L3Q9Y4A8 694 aa12.16□□□□□ -0.46
CLDN11-205ENST00000480067 SMIM28A0A1B0GU29 152 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 TTC26A0AVF1 554 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 TBKBP1A7MCY6 615 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 SMTNL1A8MU46 457 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 LACTBL1A8MY62 500 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 MAPK13O15264 365 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 SLC16A3O15427 465 aaKnown RBP12.15□□□□□ -0.46
CLDN11-205ENST00000480067 TLL1O43897 1013 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 KRT13P13646 458 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 RNASELQ05823 741 aaKnown RBP12.15□□□□□ -0.46
CLDN11-205ENST00000480067 SURF1Q15526 300 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 INTS8Q75QN2 995 aaKnown RBP12.15□□□□□ -0.46
CLDN11-205ENST00000480067 BRSK2Q8IWQ3 736 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 SNX27Q96L92 541 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 MFSD14AQ96MC6 490 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 FNBP1Q96RU3 617 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 RAD9AQ99638 391 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 THAP9Q9H5L6 903 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 METTL14Q9HCE5 456 aaKnown RBP12.15□□□□□ -0.46
CLDN11-205ENST00000480067 PDE11AQ9HCR9 933 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 MAGEC2Q9UBF1 373 aaPredicted RBP12.15□□□□□ -0.46
CLDN11-205ENST00000480067 ARMCX3Q9UH62 379 aaPredicted RBP12.15□□□□□ -0.46
CLDN11-205ENST00000480067 INSL6Q9Y581 213 aa12.15□□□□□ -0.46
CLDN11-205ENST00000480067 IKBKBO14920 756 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 POMCP01189 267 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 THP07101 528 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 ADRB2P07550 413 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 DLATP10515 647 aaKnown RBP12.14□□□□□ -0.47
CLDN11-205ENST00000480067 KCNE1P15382 129 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 GATMP50440 423 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 AFF1P51825 1210 aaKnown RBP12.14□□□□□ -0.47
CLDN11-205ENST00000480067 SPAG1Q07617 926 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 CYP24A1Q07973 514 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 PSMD6Q15008 389 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 CCDC40Q4G0X9 1142 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 XKR4Q5GH76 650 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 FRMD5Q7Z6J6 570 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 FAM114A1Q8IWE2 563 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 AOPEPQ8N6M6 819 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 KIF12Q96FN5 646 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 CASD1Q96PB1 797 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 TSPAN18Q96SJ8 248 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 MRPL9Q9BYD2 267 aaKnown RBP12.14□□□□□ -0.47
CLDN11-205ENST00000480067 RNF19AQ9NV58 838 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 FANCLQ9NW38 375 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 CNTN3Q9P232 1028 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 TTC3P53804 2025 aa12.14□□□□□ -0.47
CLDN11-205ENST00000480067 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 INPPL1O15357 1258 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 MEFVO15553 781 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 TNNI1P19237 187 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 SCNN1GP51170 649 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 VAMP7P51809 220 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 BTG3Q14201 252 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 PAN2Q504Q3 1202 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 GLRA4Q5JXX5 417 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 JADE1Q6IE81 842 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 GSTCDQ8NEC7 633 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 FAM200AQ8TCP9 573 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 PARD3BQ8TEW8 1205 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 CACTINQ8WUQ7 758 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 ZNF689Q96CS4 500 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 ZMAT2Q96NC0 199 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 FAM193BQ96PV7 902 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 POP1Q99575 1024 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 CXCL16Q9H2A7 254 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
CLDN11-205ENST00000480067 SLC38A7Q9NVC3 462 aa12.13□□□□□ -0.47
CLDN11-205ENST00000480067 MIOSQ9NXC5 875 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms