RNA–Protein interactions for RNA: ENST00000480020.5

HPS1-212, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-212ENST00000480020 TMEM169Q96HH4 297 aa13.59□□□□□ -0.23
HPS1-212ENST00000480020 ZMAT2Q96NC0 199 aaKnown RBP13.59□□□□□ -0.23
HPS1-212ENST00000480020 MSTO1Q9BUK6 570 aa13.59□□□□□ -0.23
HPS1-212ENST00000480020 VN1R3Q9BXE9 311 aa13.59□□□□□ -0.23
HPS1-212ENST00000480020 NSUN3Q9H649 340 aaKnown RBP13.59□□□□□ -0.23
HPS1-212ENST00000480020 TLR9Q9NR96 1032 aa13.59□□□□□ -0.23
HPS1-212ENST00000480020 CNTN3Q9P232 1028 aa13.59□□□□□ -0.23
HPS1-212ENST00000480020 CACNG4Q9UBN1 327 aa13.59□□□□□ -0.23
HPS1-212ENST00000480020 EXOC7Q9UPT5 735 aa13.59□□□□□ -0.23
HPS1-212ENST00000480020 FAN1Q9Y2M0 1017 aa13.59□□□□□ -0.23
HPS1-212ENST00000480020 PRG3Q9Y2Y8 225 aaPredicted RBP13.59□□□□□ -0.23
HPS1-212ENST00000480020 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 F8W810 466 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 EIF3DO15371 548 aaKnown RBP eCLIP13.58□□□□□ -0.24
HPS1-212ENST00000480020 ALDH2P05091 517 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 CXCL8P10145 99 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 KCNE1P15382 129 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 DPYDQ12882 1025 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 KYAT1Q16773 422 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 KMT5BQ4FZB7 885 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 SLFN12LQ6IEE8 588 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 STXBP4Q6ZWJ1 553 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 DDX53Q86TM3 631 aaKnown RBP13.58□□□□□ -0.24
HPS1-212ENST00000480020 IPO9Q96P70 1041 aaKnown RBP13.58□□□□□ -0.24
HPS1-212ENST00000480020 PAAF1Q9BRP4 392 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 PRDM6Q9NQX0 595 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 PUF60Q9UHX1 559 aaKnown RBP13.58□□□□□ -0.24
HPS1-212ENST00000480020 CPSF3Q9UKF6 684 aaKnown RBP13.58□□□□□ -0.24
HPS1-212ENST00000480020 PLXNA4Q9HCM2 1894 aa13.58□□□□□ -0.24
HPS1-212ENST00000480020 ATG2AQ2TAZ0 1938 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 TTC26A0AVF1 554 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 CASTOR2A6NHX0 329 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 GADD45BO75293 160 aaPredicted RBP13.57□□□□□ -0.24
HPS1-212ENST00000480020 EFEMP2O95967 443 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 RPN1P04843 607 aaKnown RBP13.57□□□□□ -0.24
HPS1-212ENST00000480020 ADRB2P07550 413 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 FAM160A1Q05DH4 1040 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 SOX4Q06945 474 aaPredicted RBP13.57□□□□□ -0.24
HPS1-212ENST00000480020 POSTNQ15063 836 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 ENOX2Q16206 610 aaKnown RBP13.57□□□□□ -0.24
HPS1-212ENST00000480020 BMT2Q1RMZ1 405 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 PDE12Q6L8Q7 609 aaKnown RBP13.57□□□□□ -0.24
HPS1-212ENST00000480020 ADGRD2Q7Z7M1 963 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 SYCP3Q8IZU3 236 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 ZNF507Q8TCN5 953 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 SCFD1Q8WVM8 642 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 POMGNT1Q8WZA1 660 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 RABGGTAQ92696 567 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 TCF25Q9BQ70 676 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 ZBP1Q9H171 429 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 TMEM206Q9H813 350 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 PLEKHA5Q9HAU0 1116 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 SLC39A2Q9NP94 309 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 EXOC1Q9NV70 894 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
HPS1-212ENST00000480020 UBE4BO95155 1302 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 BRWD1Q9NSI6 2320 aa13.57□□□□□ -0.24
HPS1-212ENST00000480020 NR1I2O75469 434 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 GARTP22102 1010 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 ACOT2P49753 483 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 HYAL1Q12794 435 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 HSP90AA2PQ14568 343 aaPredicted RBP13.56□□□□□ -0.24
HPS1-212ENST00000480020 COL19A1Q14993 1142 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 PLPP4Q5VZY2 271 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 RNF168Q8IYW5 571 aaPredicted RBP13.56□□□□□ -0.24
HPS1-212ENST00000480020 VPS52Q8N1B4 723 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 KIAA0895Q8NCT3 520 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 MICAL1Q8TDZ2 1067 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 CBWD1Q9BRT8 395 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 COLEC11Q9BWP8 271 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 RPF1Q9H9Y2 349 aaKnown RBP13.56□□□□□ -0.24
HPS1-212ENST00000480020 GOLGA2P5Q9HBQ8 144 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 NGRNQ9NPE2 291 aaKnown RBP13.56□□□□□ -0.24
HPS1-212ENST00000480020 ENTPD7Q9NQZ7 604 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 SLC38A7Q9NVC3 462 aa13.56□□□□□ -0.24
HPS1-212ENST00000480020 TDRD15B5MCY1 1934 aaKnown RBP13.55□□□□□ -0.24
HPS1-212ENST00000480020 HIDE1A8MVS5 230 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 LACTBL1A8MY62 500 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 TGFB1I1O43294 461 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 RHOBTB3O94955 611 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 KIF4AO95239 1232 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 CTSAP10619 480 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 IGFBP6P24592 240 aaPredicted RBP13.55□□□□□ -0.24
HPS1-212ENST00000480020 GTF2F1P35269 517 aaKnown RBP eCLIP13.55□□□□□ -0.24
HPS1-212ENST00000480020 STK4Q13043 487 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 PSMD2Q13200 908 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 SKIV2LQ15477 1246 aaKnown RBP13.55□□□□□ -0.24
HPS1-212ENST00000480020 KANK3Q6NY19 840 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 CRELD2Q6UXH1 353 aaPredicted RBP13.55□□□□□ -0.24
HPS1-212ENST00000480020 TAS1R1Q7RTX1 841 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 TMC7Q7Z402 723 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 MRPL43Q8N983 215 aaKnown RBP13.55□□□□□ -0.24
HPS1-212ENST00000480020 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 C18orf25Q96B23 403 aaPredicted RBP13.55□□□□□ -0.24
HPS1-212ENST00000480020 HERC2P3Q9BVR0 1158 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 STK39Q9UEW8 545 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 ADAM28Q9UKQ2 775 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 EYSQ5T1H1 3165 aa13.55□□□□□ -0.24
HPS1-212ENST00000480020 C2orf71A6NGG8 1288 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms