RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 FAM171A1Q5VUB5 890 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 PRSS55Q6UWB4 352 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-218ENST00000479554 SPATA31D4Q6ZUB0 917 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 C1orf186Q6ZWK4 172 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 SMG7Q92540 1137 aaKnown RBP15.74■□□□□ 0.11
ATG4B-218ENST00000479554 STAMQ92783 540 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 CDK5RAP3Q96JB5 506 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 ACO2Q99798 780 aaKnown RBP15.74■□□□□ 0.11
ATG4B-218ENST00000479554 TTPALQ9BTX7 342 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 RHOBTB2Q9BYZ6 727 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 NT5C3AQ9H0P0 336 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 TMEM134Q9H6X4 195 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 C17orf75Q9HAS0 396 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 ARHGAP28Q9P2N2 729 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-218ENST00000479554 KMT2EQ8IZD2 1858 aa15.74■□□□□ 0.11
ATG4B-218ENST00000479554 CLUHO75153 1309 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 GUCY2CP25092 1073 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 GRM5P41594 1212 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 YARSP54577 528 aaKnown RBP15.73■□□□□ 0.11
ATG4B-218ENST00000479554 PSMD5Q16401 504 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 ARL6IP4Q66PJ3 421 aaKnown RBP15.73■□□□□ 0.11
ATG4B-218ENST00000479554 CEP57Q86XR8 500 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 KCTD17Q8N5Z5 321 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 CEP120Q8N960 986 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 PRSS33Q8NF86 280 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 PIK3R5Q8WYR1 880 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 PNMA5Q96PV4 448 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 PPP1R10Q96QC0 940 aaKnown RBP15.73■□□□□ 0.11
ATG4B-218ENST00000479554 PRRX2Q99811 253 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 CCDC94Q9BW85 323 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-218ENST00000479554 CDT1Q9H211 546 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 SMOC2Q9H3U7 446 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 WDR6Q9NNW5 1121 aaKnown RBP15.73■□□□□ 0.11
ATG4B-218ENST00000479554 TOPORSQ9NS56 1045 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-218ENST00000479554 ZDHHC7Q9NXF8 308 aa15.73■□□□□ 0.11
ATG4B-218ENST00000479554 SLC16A4O15374 487 aa15.72■□□□□ 0.11
ATG4B-218ENST00000479554 PDGFBP01127 241 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-218ENST00000479554 VCPP55072 806 aaKnown RBP15.72■□□□□ 0.11
ATG4B-218ENST00000479554 RAD51AP2Q09MP3 1159 aa15.72■□□□□ 0.11
ATG4B-218ENST00000479554 IER5LQ5T953 404 aa15.72■□□□□ 0.11
ATG4B-218ENST00000479554 PDXDC1Q6P996 788 aa15.72■□□□□ 0.11
ATG4B-218ENST00000479554 LILRA6Q6PI73 481 aa15.72■□□□□ 0.11
ATG4B-218ENST00000479554 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-218ENST00000479554 TAS1R3Q7RTX0 852 aa15.72■□□□□ 0.11
ATG4B-218ENST00000479554 ZNF707Q96C28 371 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-218ENST00000479554 UROC1Q96N76 676 aa15.72■□□□□ 0.11
ATG4B-218ENST00000479554 PLIN2Q99541 437 aa15.72■□□□□ 0.11
ATG4B-218ENST00000479554 TARS2Q9BW92 718 aaKnown RBP15.72■□□□□ 0.11
ATG4B-218ENST00000479554 PIDD1Q9HB75 910 aa15.72■□□□□ 0.11
ATG4B-218ENST00000479554 SFI1A8K8P3 1242 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 TMEM189-UBE2V1I3L0A0 370 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 B3GAT3O94766 335 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 HSP90AA1P07900 732 aaKnown RBP15.71■□□□□ 0.11
ATG4B-218ENST00000479554 MCF2P10911 925 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 GBP2P32456 591 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-218ENST00000479554 CLCNKBP51801 687 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 PTPN5P54829 565 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 OSTNP61366 133 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 STRN3Q13033 797 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 LIN9Q5TKA1 542 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
ATG4B-218ENST00000479554 MPZL3Q6UWV2 235 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 SYT2Q8N9I0 419 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-218ENST00000479554 LNX1Q8TBB1 728 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-218ENST00000479554 SPIRE2Q8WWL2 714 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 TCHPQ9BT92 498 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 PTPRHQ9HD43 1115 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 KCND2Q9NZV8 630 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 KCNG1Q9UIX4 513 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 FBXW11Q9UKB1 542 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 ZDBF2Q9HCK1 2354 aa15.71■□□□□ 0.11
ATG4B-218ENST00000479554 MTCL1Q9Y4B5 1905 aaKnown RBP15.7■□□□□ 0.1
ATG4B-218ENST00000479554 SMIM28A0A1B0GU29 152 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 N4BP1O75113 896 aaKnown RBP15.7■□□□□ 0.1
ATG4B-218ENST00000479554 ZMYND10O75800 440 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 PAPLNO95428 1278 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 PLA2G4BP0C869 781 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 HARSP12081 509 aaKnown RBP15.7■□□□□ 0.1
ATG4B-218ENST00000479554 PLS3P13797 630 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 PROZP22891 400 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 AVPR2P30518 371 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 SMTNP53814 917 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 SLC12A3P55017 1021 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 TDGQ13569 410 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 TMEM119Q4V9L6 283 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 DCLRE1AQ6PJP8 1040 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 ALYREFQ86V81 257 aaKnown RBP15.7■□□□□ 0.1
ATG4B-218ENST00000479554 SNX27Q96L92 541 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 AK8Q96MA6 479 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 CLSTN3Q9BQT9 956 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 PRKD2Q9BZL6 878 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 KCNK12Q9HB15 430 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 GOLGA2P5Q9HBQ8 144 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 SLC38A7Q9NVC3 462 aa15.7■□□□□ 0.1
ATG4B-218ENST00000479554 SLC26A4O43511 780 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 TRAPPC3O43617 180 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 BMP15O95972 392 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 FGFR3P22607 806 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 UBA7P41226 1012 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms