RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 SYT2Q8N9I0 419 aaPredicted RBP9.96□□□□□ -0.82
CMTM1-208ENST00000479381 NOC3LQ8WTT2 800 aaKnown RBP9.96□□□□□ -0.82
CMTM1-208ENST00000479381 LARP4BQ92615 738 aaKnown RBP9.96□□□□□ -0.82
CMTM1-208ENST00000479381 MMTAG2Q9BU76 263 aaKnown RBP9.96□□□□□ -0.82
CMTM1-208ENST00000479381 HERC2P3Q9BVR0 1158 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 TARS2Q9BW92 718 aaKnown RBP9.96□□□□□ -0.82
CMTM1-208ENST00000479381 C1QTNF1Q9BXJ1 281 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 C17orf75Q9HAS0 396 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 DZANK1Q9NVP4 752 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 MIOSQ9NXC5 875 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 KCND2Q9NZV8 630 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 DAXXQ9UER7 740 aaPredicted RBP9.96□□□□□ -0.82
CMTM1-208ENST00000479381 PRKAG3Q9UGI9 489 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 VPS9D1Q9Y2B5 631 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 USP15Q9Y4E8 981 aaPredicted RBP9.96□□□□□ -0.82
CMTM1-208ENST00000479381 HCFC2Q9Y5Z7 792 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 PRUNE2Q8WUY3 3088 aa9.96□□□□□ -0.82
CMTM1-208ENST00000479381 SF3B1O75533 1304 aaKnown RBP eCLIP9.96□□□□□ -0.82
CMTM1-208ENST00000479381 SLC26A4O43511 780 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 GLP2RO95838 553 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 ALADP13716 330 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 IDEP14735 1019 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 GUCY2CP25092 1073 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 TUSC3Q13454 348 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 HSP90AA2PQ14568 343 aaPredicted RBP9.95□□□□□ -0.82
CMTM1-208ENST00000479381 SMAD2Q15796 467 aaKnown RBP9.95□□□□□ -0.82
CMTM1-208ENST00000479381 TMEM119Q4V9L6 283 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 C1orf186Q6ZWK4 172 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 DYMQ7RTS9 669 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 KCTD17Q8N5Z5 321 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 BCL7CQ8WUZ0 217 aaPredicted RBP9.95□□□□□ -0.82
CMTM1-208ENST00000479381 RIN2Q8WYP3 895 aaPredicted RBP9.95□□□□□ -0.82
CMTM1-208ENST00000479381 RAD54LQ92698 747 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 RIPOR3Q96MK2 946 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 ACAP3Q96P50 834 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 CCDC113Q9H0I3 377 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 TMEM134Q9H6X4 195 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 PIDD1Q9HB75 910 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 PARVGQ9HBI0 331 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 CLEC1BQ9P126 229 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 CACNG4Q9UBN1 327 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 DPP7Q9UHL4 492 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 ADAM28Q9UKQ2 775 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 NUB1Q9Y5A7 615 aa9.95□□□□□ -0.82
CMTM1-208ENST00000479381 FAM86C2PA6NEL3 165 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 HNRNPDLO14979 420 aaKnown RBP9.94□□□□□ -0.82
CMTM1-208ENST00000479381 CLDN3O15551 220 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 B4GALT3O60512 393 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 GLUD1P00367 558 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 WEE2P0C1S8 567 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 EPCAMP16422 314 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 HOXB8P17481 243 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-208ENST00000479381 SLC12A3P55017 1021 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 GRIN1Q05586 938 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 ZP2Q05996 745 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 COASYQ13057 564 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 CBX2Q14781 532 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-208ENST00000479381 NOLC1Q14978 699 aaKnown RBP eCLIP9.94□□□□□ -0.82
CMTM1-208ENST00000479381 PTPN14Q15678 1187 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 USP41Q3LFD5 358 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 ATAT1Q5SQI0 421 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 HYIQ5T013 277 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 NT5DC1Q5TFE4 455 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 FAM171A1Q5VUB5 890 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 MPZL3Q6UWV2 235 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 TMC5Q6UXY8 1006 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 CCDC73Q6ZRK6 1079 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 SV2BQ7L1I2 683 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 PALB2Q86YC2 1186 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 PDILTQ8N807 584 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 C12orf76Q8N812 135 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-208ENST00000479381 SMRP1Q8NCR6 262 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 SNX21Q969T3 373 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 B3GALT6Q96L58 329 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 CLIC6Q96NY7 704 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 USP28Q96RU2 1077 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 ACO2Q99798 780 aaKnown RBP9.94□□□□□ -0.82
CMTM1-208ENST00000479381 REEP2Q9BRK0 252 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 PHF7Q9BWX1 381 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-208ENST00000479381 SLC4A5Q9BY07 1137 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 PANK2Q9BZ23 570 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 CDT1Q9H211 546 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 SFXN1Q9H9B4 322 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 MARCH5Q9NX47 278 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 ODF2LQ9ULJ1 636 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 MTMR6Q9Y217 621 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 TNFSF13BQ9Y275 285 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 NR2E1Q9Y466 385 aa9.94□□□□□ -0.82
CMTM1-208ENST00000479381 DCXO43602 365 aa9.93□□□□□ -0.82
CMTM1-208ENST00000479381 TRAK2O60296 914 aa9.93□□□□□ -0.82
CMTM1-208ENST00000479381 B3GAT3O94766 335 aa9.93□□□□□ -0.82
CMTM1-208ENST00000479381 EDN1P05305 212 aa9.93□□□□□ -0.82
CMTM1-208ENST00000479381 CNPP09543 421 aaKnown RBP9.93□□□□□ -0.82
CMTM1-208ENST00000479381 MCF2P10911 925 aa9.93□□□□□ -0.82
CMTM1-208ENST00000479381 GRM5P41594 1212 aa9.93□□□□□ -0.82
CMTM1-208ENST00000479381 MTHFRP42898 656 aa9.93□□□□□ -0.82
CMTM1-208ENST00000479381 CREMQ03060 361 aa9.93□□□□□ -0.82
CMTM1-208ENST00000479381 PPP2R3AQ06190 1150 aa9.93□□□□□ -0.82
CMTM1-208ENST00000479381 ELAVL2Q12926 359 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms