RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TMEM110-MUSTN1A8MSY1 372 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 UQCRFS1P1P0C7P4 283 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 CETN2P41208 172 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 SPARCL1Q14515 664 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 LLGL1Q15334 1064 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 PDK4Q16654 411 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 VGLL2Q8N8G2 317 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 DIS3LQ8TF46 1054 aaKnown RBP22.57■■□□□ 1.2
SDF4-206ENST00000478938 NSL1Q96IY1 281 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 NINJ2Q9NZG7 142 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 COG5Q9UP83 839 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 SYNGAP1Q96PV0 1343 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 CDH16O75309 829 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 KCNA6P17658 529 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 PGM1P36871 562 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 KLHL35Q6PF15 583 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 ISLR2Q6UXK2 745 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 IRGQQ8WZA9 623 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 PPM1HQ9ULR3 514 aa22.57■■□□□ 1.2
SDF4-206ENST00000478938 TMEM247A6NEH6 219 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 SNAP23O00161 211 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 TOM1O60784 492 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 PON1P27169 355 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 DCTN2Q13561 401 aaKnown RBP22.56■■□□□ 1.2
SDF4-206ENST00000478938 KLHDC10Q6PID8 442 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 CCDC80Q76M96 950 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 CEP63Q96MT8 703 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 SPZ1Q9BXG8 430 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 CPA2P48052 419 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 EVX2Q03828 476 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 COASYQ13057 564 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 TMEM53Q6P2H8 277 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 KCNK18Q7Z418 384 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 TMEM110Q86TL2 294 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 DENND1AQ8TEH3 1009 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 FAM81BQ96LP2 452 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 GREM2Q9H772 168 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 FBXO6Q9NRD1 293 aaPredicted RBP22.56■■□□□ 1.2
SDF4-206ENST00000478938 HEY2Q9UBP5 337 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 EFR3BQ9Y2G0 817 aa22.56■■□□□ 1.2
SDF4-206ENST00000478938 WNK3Q9BYP7 1800 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 MTTPP55157 894 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 RASSF3Q86WH2 238 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 TREML1Q86YW5 311 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 C4orf33Q8N1A6 199 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 OLIG1Q8TAK6 271 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 HDAC9Q9UKV0 1011 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 KIF1AQ12756 1690 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 A0A0G2JND7 137 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 A8MXQ7 604 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 STK10O94804 968 aaKnown RBP22.55■■□□□ 1.2
SDF4-206ENST00000478938 GAS8O95995 478 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 RPA3P35244 121 aaPredicted RBP22.55■■□□□ 1.2
SDF4-206ENST00000478938 ITGA9Q13797 1035 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 GRM2Q14416 872 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 SLC1A5Q15758 541 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 EAPPQ56P03 285 aaPredicted RBP22.55■■□□□ 1.2
SDF4-206ENST00000478938 RGS9BPQ6ZS82 235 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 ADGRA1Q86SQ6 560 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 SETDB2Q96T68 719 aa22.55■■□□□ 1.2
SDF4-206ENST00000478938 R3HDM2Q9Y2K5 976 aaKnown RBP22.55■■□□□ 1.2
SDF4-206ENST00000478938 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.55■■□□□ 1.2
SDF4-206ENST00000478938 NUP188Q5SRE5 1749 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 BCRP11274 1271 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 MED21Q13503 144 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 RIPOR1Q6ZS17 1223 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 OR6Y1Q8NGX8 325 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 THAP2Q9H0W7 228 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 EMILIN3Q9NT22 766 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 BTBD19C9JJ37 291 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 TMEM253P0C7T8 217 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 PHKG2P15735 406 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 FAM47AQ5JRC9 791 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 FYB2Q5VWT5 728 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 TSHZ1Q6ZSZ6 1077 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 HEATR3Q7Z4Q2 680 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 ASIC3Q9UHC3 531 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 HEY1Q9Y5J3 304 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 ACTL7BQ9Y614 415 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 ALG6Q9Y672 507 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 ZMYM2Q9UBW7 1377 aa22.54■■□□□ 1.2
SDF4-206ENST00000478938 DUOX1Q9NRD9 1551 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 BUD23O43709 281 aaKnown RBP22.53■■□□□ 1.2
SDF4-206ENST00000478938 TCEA3O75764 348 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 PDE8BO95263 885 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 HSPA6P17066 643 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 ARFIP2P53365 341 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 MARSP56192 900 aaKnown RBP22.53■■□□□ 1.2
SDF4-206ENST00000478938 TBL3Q12788 808 aaKnown RBP22.53■■□□□ 1.2
SDF4-206ENST00000478938 TRIP13Q15645 432 aaPredicted RBP22.53■■□□□ 1.2
SDF4-206ENST00000478938 SFT2D3Q587I9 215 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 GRAMD4Q6IC98 578 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 RHBDF2Q6PJF5 856 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 SLC25A41Q8N5S1 370 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 RSPH1Q8WYR4 309 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 CLPTM1LQ96KA5 538 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 PRICKLE1Q96MT3 831 aaPredicted RBP22.53■■□□□ 1.2
SDF4-206ENST00000478938 EPB41L1Q9H4G0 881 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 TAS2R14Q9NYV8 317 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 ATP8B3O60423 1300 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms