RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 FAN1Q9Y2M0 1017 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 DSPP15924 2871 aaKnown RBP16.06■□□□□ 0.16
USP11-207ENST00000478596 WDR81Q562E7 1941 aa16.06■□□□□ 0.16
USP11-207ENST00000478596 NBEAQ8NFP9 2946 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 SHISA7A6NL88 538 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 MEIS3P2A8K0S8 358 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 GAS2O43903 313 aaKnown RBP16.05■□□□□ 0.16
USP11-207ENST00000478596 DDHD2O94830 711 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 KCNK5O95279 499 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 YEATS4O95619 227 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 EFEMP2O95967 443 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 SPATA31D3P0C874 917 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 FGFR4P22455 802 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 MARCKSP29966 332 aaPredicted RBP16.05■□□□□ 0.16
USP11-207ENST00000478596 CNR2P34972 360 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 ME1P48163 572 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 ATP2C1P98194 919 aaPredicted RBP16.05■□□□□ 0.16
USP11-207ENST00000478596 AASDHQ4L235 1098 aaPredicted RBP16.05■□□□□ 0.16
USP11-207ENST00000478596 NCAPH2Q6IBW4 605 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 SWSAP1Q6NVH7 229 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 EFCAB12Q6NXP0 572 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 DTHD1Q6ZMT9 781 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 SPATA31D4Q6ZUB0 917 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 RASSF8Q8NHQ8 419 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 LENG9Q96B70 501 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 FAM20AQ96MK3 541 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 MBOAT7Q96N66 472 aa16.05■□□□□ 0.16
USP11-207ENST00000478596 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
USP11-207ENST00000478596 MAFBQ9Y5Q3 323 aaPredicted RBP16.05■□□□□ 0.16
USP11-207ENST00000478596 SMG1Q96Q15 3661 aaKnown RBP16.05■□□□□ 0.16
USP11-207ENST00000478596 VWA3AA6NCI4 1184 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 GOLGA6L4A6NEF3 574 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 NRP1O14786 923 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 TBX3O15119 743 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 SPTLC2O15270 562 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 TGM5O43548 720 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 HRO43593 1189 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 NASPP49321 788 aaPredicted RBP16.04■□□□□ 0.16
USP11-207ENST00000478596 GLUD2P49448 558 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 CCR3P51677 355 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 LONRF3Q496Y0 759 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 MIS18BP1Q6P0N0 1132 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 LILRA6Q6PI73 481 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 TAS1R1Q7RTX1 841 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 ETNPPLQ8TBG4 499 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 URGCPQ8TCY9 931 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 FGF13Q92913 245 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 GJA10Q969M2 543 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 LSM14BQ9BX40 385 aaKnown RBP16.04■□□□□ 0.16
USP11-207ENST00000478596 TMEM60Q9H2L4 133 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 TTC12Q9H892 705 aaPredicted RBP16.04■□□□□ 0.16
USP11-207ENST00000478596 GDPD2Q9HCC8 539 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 TBC1D22BQ9NU19 505 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 FAM105AQ9NUU6 356 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 WASF3Q9UPY6 502 aa16.04■□□□□ 0.16
USP11-207ENST00000478596 ITPR1Q14643 2758 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 EVPLQ92817 2033 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 GOLGA6L22H0YM25 854 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 TAF4O00268 1085 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 ZMYND10O75800 440 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 RAB27AP51159 221 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 DSG1Q02413 1049 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
USP11-207ENST00000478596 GPR65Q8IYL9 337 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 LRRC71Q8N4P6 559 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 SLC5A5Q92911 643 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 ZNF668Q96K58 619 aaPredicted RBP16.03■□□□□ 0.16
USP11-207ENST00000478596 SCLT1Q96NL6 688 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 KCNMB3Q9NPA1 279 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 MARCH5Q9NX47 278 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 KANSL3Q9P2N6 904 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 PCDHA12Q9UN75 941 aa16.03■□□□□ 0.16
USP11-207ENST00000478596 TXLNAP40222 546 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 PRPHP41219 470 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 SLC39A14Q15043 492 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 STPG1Q5TH74 334 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 ARL6IP4Q66PJ3 421 aaKnown RBP16.02■□□□□ 0.16
USP11-207ENST00000478596 MIER3Q7Z3K6 550 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 GRASPQ7Z6J2 395 aaPredicted RBP16.02■□□□□ 0.16
USP11-207ENST00000478596 PALB2Q86YC2 1186 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 KRI1Q8N9T8 703 aaKnown RBP16.02■□□□□ 0.16
USP11-207ENST00000478596 LINC00301Q8NCQ3 95 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 ERMNQ8TAM6 284 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 PGBD4Q96DM1 585 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 RIT2Q99578 217 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 KXD1Q9BQD3 176 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.02■□□□□ 0.16
USP11-207ENST00000478596 CHST7Q9NS84 486 aa16.02■□□□□ 0.16
USP11-207ENST00000478596 WDR64B1ANS9 1081 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 DHX15O43143 795 aaKnown RBP16.01■□□□□ 0.15
USP11-207ENST00000478596 EDIL3O43854 480 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 CSDE1O75534 798 aaKnown RBP16.01■□□□□ 0.15
USP11-207ENST00000478596 JAK3P52333 1124 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 ZRSR1Q15695 479 aaKnown RBP16.01■□□□□ 0.15
USP11-207ENST00000478596 AGMOQ6ZNB7 445 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 FAM160A2Q8N612 972 aaPredicted RBP16.01■□□□□ 0.15
USP11-207ENST00000478596 C12orf50Q8NA57 414 aaPredicted RBP16.01■□□□□ 0.15
USP11-207ENST00000478596 LEO1Q8WVC0 666 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms