RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 NXPE3Q969Y0 559 aa18.43■□□□□ 0.54
TRIM13-208ENST00000478111 RTP3Q9BQQ7 232 aa18.43■□□□□ 0.54
TRIM13-208ENST00000478111 LLPHQ9BRT6 129 aaKnown RBP18.43■□□□□ 0.54
TRIM13-208ENST00000478111 KIFC3Q9BVG8 833 aa18.43■□□□□ 0.54
TRIM13-208ENST00000478111 PIDD1Q9HB75 910 aa18.43■□□□□ 0.54
TRIM13-208ENST00000478111 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.43■□□□□ 0.541e-8■■■■■ 29.9
TRIM13-208ENST00000478111 DMXL1Q9Y485 3027 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 CACNA1IQ9P0X4 2223 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 SRFP11831 508 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 FXR2P51116 673 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM13-208ENST00000478111 NBR1Q14596 966 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 PSMD5Q16401 504 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 CD300LGQ6UXG3 332 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 GET4Q7L5D6 327 aaPredicted RBP18.42■□□□□ 0.54
TRIM13-208ENST00000478111 FRMD5Q7Z6J6 570 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 DEPTORQ8TB45 409 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 BHMT2Q9H2M3 363 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 CITO14578 2027 aa18.42■□□□□ 0.54
TRIM13-208ENST00000478111 LIG1P18858 919 aa18.41■□□□□ 0.54
TRIM13-208ENST00000478111 HTR4Q13639 388 aa18.41■□□□□ 0.54
TRIM13-208ENST00000478111 PPP2R5AQ15172 486 aa18.41■□□□□ 0.54
TRIM13-208ENST00000478111 TMEM132AQ24JP5 1023 aa18.41■□□□□ 0.54
TRIM13-208ENST00000478111 CEP57Q86XR8 500 aa18.41■□□□□ 0.54
TRIM13-208ENST00000478111 DTWD2Q8NBA8 298 aa18.41■□□□□ 0.54
TRIM13-208ENST00000478111 ST13P5Q8NFI4 369 aaPredicted RBP18.41■□□□□ 0.54
TRIM13-208ENST00000478111 GPR152Q8TDT2 470 aa18.41■□□□□ 0.54
TRIM13-208ENST00000478111 PPP1R10Q96QC0 940 aaKnown RBP18.41■□□□□ 0.54
TRIM13-208ENST00000478111 ADPGKQ9BRR6 497 aa18.41■□□□□ 0.54
TRIM13-208ENST00000478111 GDAQ9Y2T3 454 aa18.41■□□□□ 0.54
TRIM13-208ENST00000478111 FGFR3P22607 806 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 CCT6AP40227 531 aaKnown RBP18.4■□□□□ 0.54
TRIM13-208ENST00000478111 TRAPPC10P48553 1259 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 RBM25P49756 843 aaKnown RBP18.4■□□□□ 0.54
TRIM13-208ENST00000478111 TOB1P50616 345 aaPredicted RBP18.4■□□□□ 0.54
TRIM13-208ENST00000478111 EFNA5P52803 228 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 NTHL1P78549 312 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 ELAVL2Q12926 359 aaKnown RBP18.4■□□□□ 0.54
TRIM13-208ENST00000478111 PDIA5Q14554 519 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 DCAF4L1Q3SXM0 396 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 ERICH6BQ5W0A0 696 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 HAUS3Q68CZ6 603 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 RSPO2Q6UXX9 243 aaPredicted RBP18.4■□□□□ 0.54
TRIM13-208ENST00000478111 GRASPQ7Z6J2 395 aaPredicted RBP18.4■□□□□ 0.54
TRIM13-208ENST00000478111 KIFAP3Q92845 792 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 KIF2CQ99661 725 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 RPP25Q9BUL9 199 aaKnown RBP18.4■□□□□ 0.54
TRIM13-208ENST00000478111 LRWD1Q9UFC0 647 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 CA14Q9ULX7 337 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 KIAA1024Q9UPX6 916 aa18.4■□□□□ 0.54
TRIM13-208ENST00000478111 FANCMQ8IYD8 2048 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 TMEM189-UBE2V1I3L0A0 370 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
TRIM13-208ENST00000478111 C8AP07357 584 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 HNRNPA1P09651 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
TRIM13-208ENST00000478111 FSHRP23945 695 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 U2AF2P26368 475 aaKnown RBP eCLIP18.39■□□□□ 0.539e-7■■□□□ 13.7
TRIM13-208ENST00000478111 RAB33AQ14088 237 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 ANGPT1Q15389 498 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 GLRA4Q5JXX5 417 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 ATF7IP2Q5U623 682 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.39■□□□□ 0.53
TRIM13-208ENST00000478111 IGSF22Q8N9C0 903 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 FGF14Q92915 247 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 IFT74Q96LB3 600 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 SLC2A4RGQ9NR83 387 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 DDX19AQ9NUU7 478 aaKnown RBP18.39■□□□□ 0.53
TRIM13-208ENST00000478111 NUMBLQ9Y6R0 609 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 MYH11P35749 1972 aa18.39■□□□□ 0.53
TRIM13-208ENST00000478111 PDCD11Q14690 1871 aaKnown RBP18.38■□□□□ 0.53
TRIM13-208ENST00000478111 HOXA9P31269 272 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 CLCNKBP51801 687 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 HMGN5P82970 282 aaKnown RBP18.38■□□□□ 0.53
TRIM13-208ENST00000478111 UPP1Q16831 310 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 DCLRE1AQ6PJP8 1040 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 ALKAL1Q6UXT8 129 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 TAS1R3Q7RTX0 852 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 DAW1Q8N136 415 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 CEP120Q8N960 986 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 C3orf58Q8NDZ4 430 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 NKD2Q969F2 451 aaPredicted RBP18.38■□□□□ 0.53
TRIM13-208ENST00000478111 TBC1D17Q9HA65 648 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 GOLGA2P5Q9HBQ8 144 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 PTPRHQ9HD43 1115 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 DAXXQ9UER7 740 aaPredicted RBP18.38■□□□□ 0.53
TRIM13-208ENST00000478111 CDH7Q9ULB5 785 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 TNFSF13BQ9Y275 285 aa18.38■□□□□ 0.53
TRIM13-208ENST00000478111 ZFP37Q9Y6Q3 630 aaPredicted RBP18.38■□□□□ 0.53
TRIM13-208ENST00000478111 MIA3Q5JRA6 1907 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 SMIM28A0A1B0GU29 152 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 E9PMD0 336 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 K7ERI5 159 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 CCL16O15467 120 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 OR1D2P34982 312 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 NPTX2P47972 431 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 SOX4Q06945 474 aaPredicted RBP18.37■□□□□ 0.53
TRIM13-208ENST00000478111 PTGDRQ13258 359 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 IL17AQ16552 155 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 XKR4Q5GH76 650 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 PPM1LQ5SGD2 360 aa18.37■□□□□ 0.53
TRIM13-208ENST00000478111 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms