RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CD300LDQ6UXZ3 194 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 SPOCD1Q6ZMY3 1216 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 ARHGAP36Q6ZRI8 547 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 TBC1D1Q86TI0 1168 aaPredicted RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 FAM129CQ86XR2 697 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 CBARPQ8N350 705 aaPredicted RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 ARRDC4Q8NCT1 418 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 TTLL11Q8NHH1 800 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 SMARCC2Q8TAQ2 1214 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 KIAA1524Q8TCG1 905 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 ARHGEF2Q92974 986 aaKnown RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 TOE1Q96GM8 510 aaKnown RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 TOX2Q96NM4 488 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 ISCA1Q9BUE6 129 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 CELF4Q9BZC1 486 aaKnown RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 TRIM7Q9C029 511 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 DEF6Q9H4E7 631 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 ELAC1Q9H777 363 aaKnown RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 TRPV4Q9HBA0 871 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 FANCFQ9NPI8 374 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 STARD7Q9NQZ5 370 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 DTLQ9NZJ0 730 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 SEPT10Q9P0V9 454 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 GIMAP2Q9UG22 337 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 C2CD2Q9Y426 696 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 AFG3L2Q9Y4W6 797 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 CD2APQ9Y5K6 639 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 LRRFIP2Q9Y608 721 aaKnown RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 EPN1Q9Y6I3 576 aaPredicted RBP3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 ERICH3Q5RHP9 1530 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 ZNF804BA4D1E1 1349 aa3.93□□□□□ -1.78
FNDC3B-209ENST00000478016 A0A087X0B3 334 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 RASA4BC9J798 803 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 AKR1B15C9JRZ8 316 aaPredicted RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 AREL1O15033 823 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 HOXC11O43248 304 aaPredicted RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 RASA4O43374 803 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 NUAK1O60285 661 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 OPA1O60313 960 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 ZBED4O75132 1171 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 DNAJC8O75937 253 aaPredicted RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 CDKL5O76039 1030 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 ASLP04424 464 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 CKMP06732 381 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 C8BP07358 591 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 KRT13P13646 458 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 KRT15P19012 456 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 CNGA1P29973 690 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 IGFALSP35858 605 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 STAT5AP42229 794 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 LIMS1P48059 325 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 MXI1P50539 228 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 EPHA5P54756 1037 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 GSCP56915 257 aaPredicted RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 NKX3-2P78367 333 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 MRPS35P82673 323 aaKnown RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 FOXO4P98177 505 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 MPP1Q00013 466 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 ZBTB17Q13105 803 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 PPP2R5CQ13362 524 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 PRPF4BQ13523 1007 aaKnown RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 GBX1Q14549 363 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 COG2Q14746 738 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 POSTNQ15063 836 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 RABEP1Q15276 862 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 CFAP58Q5T655 872 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 CNKSR3Q6P9H4 555 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 ARHGEF18Q6ZSZ5 1173 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 RAPH1Q70E73 1250 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 KCTD1Q719H9 257 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 FASTKD5Q7L8L6 764 aaKnown RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 NECAB2Q7Z6G3 386 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 SRLQ86TD4 932 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 DDX53Q86TM3 631 aaKnown RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 SAPCD2Q86UD0 394 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 OSTM1Q86WC4 334 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 CILP2Q8IUL8 1156 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 LRRC56Q8IYG6 542 aaPredicted RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 TMEFF1Q8IYR6 380 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 CEP57L1Q8IYX8 460 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 NLGN4XQ8N0W4 816 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 AFAP1L2Q8N4X5 818 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 FAM26EQ8N5C1 309 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 C7orf31Q8N865 590 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 SUN5Q8TC36 379 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 OTUD7AQ8TE49 926 aaPredicted RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 NINJ1Q92982 152 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 ATP6V1E2Q96A05 226 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 PWWP2AQ96N64 755 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 KATNAL1Q9BW62 490 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 CD244Q9BZW8 370 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 NACA2Q9H009 215 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 LMAN2LQ9H0V9 348 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 INTS7Q9NVH2 962 aaKnown RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 KLHL11Q9NVR0 708 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 POGKQ9P215 609 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 LAMP5Q9UJQ1 280 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 CBLCQ9ULV8 474 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms