RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 PTPRFP10586 1907 aa18.51■□□□□ 0.55
LINC00336-201ENST00000477984 IGKV6D-21A0A0A0MT36 114 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 FAM187AA6NFU0 413 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 IRF6O14896 467 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 OATP04181 439 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 ATP4AP20648 1035 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 SCP2P22307 547 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 GTF2H1P32780 548 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 MNAT1P51948 309 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 DRG2P55039 364 aaKnown RBP18.5■□□□□ 0.55
LINC00336-201ENST00000477984 PTENP60484 403 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 IRX3P78415 501 aaPredicted RBP18.5■□□□□ 0.55
LINC00336-201ENST00000477984 MTERF2Q49AM1 385 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 DNAAF5Q86Y56 855 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 SAAL1Q96ER3 474 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 AP1M1Q9BXS5 423 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 TMEM8AQ9HCN3 771 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.5■□□□□ 0.55
LINC00336-201ENST00000477984 RNF181Q9P0P0 153 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 DDX20Q9UHI6 824 aaKnown RBP18.5■□□□□ 0.55
LINC00336-201ENST00000477984 OTOFQ9HC10 1997 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 WDR81Q562E7 1941 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 TMCO5BA8MYB1 307 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 CXCL11O14625 94 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 DAPK3O43293 454 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 SORBS3O60504 671 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 LRRN2O75325 713 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 NUDT17P0C025 328 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 HPDP32754 393 aaPredicted RBP18.5■□□□□ 0.55
LINC00336-201ENST00000477984 HADHBP55084 474 aaKnown RBP18.5■□□□□ 0.55
LINC00336-201ENST00000477984 EMC2Q15006 297 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 TCEAL1Q15170 157 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 KRT39Q6A163 491 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 CCDC121Q6ZUS5 278 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 DAAM2Q86T65 1068 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 USP37Q86T82 979 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 DDX42Q86XP3 938 aaKnown RBP eCLIP18.5■□□□□ 0.55
LINC00336-201ENST00000477984 CCDC13Q8IYE1 715 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 TATDN2Q93075 761 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 AGPAT1Q99943 283 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 AMACRQ9UHK6 382 aa18.5■□□□□ 0.55
LINC00336-201ENST00000477984 GOLGA6L7A0A1B0GV03 622 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 SOWAHBA6NEL2 793 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 DDX3YO15523 660 aaKnown RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 IFT88Q13099 833 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 SEPT14Q6ZU15 432 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 TAS1R3Q7RTX0 852 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 CROCCP2Q86T23 111 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 ERO1BQ86YB8 467 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 UBLCP1Q8WVY7 318 aaPredicted RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 POMGNT1Q8WZA1 660 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 MYCBPQ99417 103 aaPredicted RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 ELP3Q9H9T3 547 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 PPANQ9NQ55 473 aaKnown RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 POLR2AP24928 1970 aaKnown RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 CHUKO15111 745 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 GHRP10912 638 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 ITGA4P13612 1032 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 YBX3P16989 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 UBA1P22314 1058 aaKnown RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 GBP1P32455 592 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 POLGP54098 1239 aaPredicted RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 CYP24A1Q07973 514 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 DHX34Q14147 1143 aaKnown RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 NCAPG2Q86XI2 1143 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 GPD1LQ8N335 351 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 ZNF526Q8TF50 670 aaPredicted RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 NIFKQ9BYG3 293 aaKnown RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 GOLPH3Q9H4A6 298 aa18.49■□□□□ 0.55
LINC00336-201ENST00000477984 DHX33Q9H6R0 707 aaKnown RBP18.49■□□□□ 0.55
LINC00336-201ENST00000477984 HNRNPDLO14979 420 aaKnown RBP18.48■□□□□ 0.55
LINC00336-201ENST00000477984 TTI1O43156 1089 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 PEX10O60683 326 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 FLT3P36888 993 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 GPC3P51654 580 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 RNF187Q5TA31 235 aaPredicted RBP18.48■□□□□ 0.55
LINC00336-201ENST00000477984 DUPD1Q68J44 220 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.48■□□□□ 0.55
LINC00336-201ENST00000477984 HOOK3Q86VS8 718 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 ANKRD13AQ8IZ07 590 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 OR2W6PQ8NHA6 318 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 MAGEC3Q8TD91 643 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 ATP8B4Q8TF62 1192 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 CTNNBL1Q8WYA6 563 aaPredicted RBP18.48■□□□□ 0.55
LINC00336-201ENST00000477984 RAPGEF5Q92565 580 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 OTUD5Q96G74 571 aa18.48■□□□□ 0.55
LINC00336-201ENST00000477984 DOCK5Q9H7D0 1870 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 SPDYE5A6NIY4 337 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 CNMDO75829 334 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 HSPA6P17066 643 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 MAP2K1Q02750 393 aaPredicted RBP18.47■□□□□ 0.55
LINC00336-201ENST00000477984 DHX9Q08211 1270 aaKnown RBP18.47■□□□□ 0.55
LINC00336-201ENST00000477984 CCDC50Q8IVM0 306 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 FAM71AQ8IYT1 594 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 SEMA4DQ92854 862 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 CCDC127Q96BQ5 260 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 SEC16BQ96JE7 1060 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 FMO2Q99518 471 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 PORCNQ9H237 461 aa18.47■□□□□ 0.55
LINC00336-201ENST00000477984 KLC4Q9NSK0 619 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms