RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 LIMCH1Q9UPQ0 1083 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 KLRG2A4D1S0 409 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 HTRA2O43464 458 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 SREBF1P36956 1147 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 PER3P56645 1201 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 CRHR2Q13324 411 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 SP140Q13342 867 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 RRP1BQ14684 758 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 ARHGAP29Q52LW3 1261 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 FAM47AQ5JRC9 791 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 ATAT1Q5SQI0 421 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 C1QL3Q5VWW1 255 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 DRICH1Q6PGQ1 229 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 Q6ZRM9 215 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 ZNF572Q7Z3I7 529 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 TMPRSS6Q8IU80 811 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 PRR18Q8N4B5 295 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 MDM1Q8TC05 714 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 SH3RF3Q8TEJ3 882 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 ATXN2LQ8WWM7 1075 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 HPS3Q969F9 1004 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 CPPED1Q9BRF8 314 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 LSM14BQ9BX40 385 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 GPR87Q9BY21 358 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 PRDM11Q9NQV5 511 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 HDAC5Q9UQL6 1122 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 IPPQ9Y573 584 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 ZMYM3Q14202 1370 aa5.92□□□□□ -1.46
SMNDC1-205ENST00000477763 VSTM5A8MXK1 200 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 PJA2O43164 708 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 CTNND1O60716 968 aaKnown RBP5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 CAND2O75155 1236 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 INSRRP14616 1297 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 SCNN1GP51170 649 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 CNGB1Q14028 1251 aaPredicted RBP5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 SEPT2Q15019 361 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 USP39Q53GS9 565 aaKnown RBP5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 CATIPQ7Z7H3 387 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 RHOT1Q8IXI2 618 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 GRAMD1CQ8IYS0 662 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 PQLC1Q8N2U9 271 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 MB21D1Q8N884 522 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 IL17DQ8TAD2 202 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 CASKIN2Q8WXE0 1202 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 EXTL1Q92935 676 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 C1GALT1C1Q96EU7 318 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 MVB12AQ96EY5 273 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 UHRF1Q96T88 793 aaPredicted RBP5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 MNTQ99583 582 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 GTPBP4Q9BZE4 634 aaKnown RBP5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 SLC12A5Q9H2X9 1139 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 MANSC1Q9H8J5 431 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 ANLNQ9NQW6 1124 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 LANCL2Q9NS86 450 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 OBP2AQ9NY56 170 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 CFAP20Q9Y6A4 193 aaKnown RBP5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 XDHP47989 1333 aa5.91□□□□□ -1.46
SMNDC1-205ENST00000477763 TBKBP1A7MCY6 615 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 PRR5-ARHGAP8B1AHC4 643 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 PLSCR1O15162 318 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 ADCY6O43306 1168 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 IL2RBP14784 551 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 ALOX15P16050 662 aaPredicted RBP5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 EDNRBP24530 442 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 GUCY1A2P33402 732 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 TBX4P57082 545 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 PTH1RQ03431 593 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 VPS72Q15906 364 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 PGS1Q32NB8 556 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 MFSD14BQ5SR56 506 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 THEMIS2Q5TEJ8 643 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 SPRED1Q7Z699 444 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 TTC7BQ86TV6 843 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 C1orf210Q8IVY1 113 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 CEP95Q96GE4 821 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 CPEB1Q9BZB8 566 aaKnown RBP5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 C1orf112Q9NSG2 853 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 MOCS1Q9NZB8 636 aa5.9□□□□□ -1.46
SMNDC1-205ENST00000477763 ATRNL1Q5VV63 1379 aa5.9□□□□□ -1.47
SMNDC1-205ENST00000477763 MATN3O15232 486 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 TEX33O43247 280 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 KRT18P05783 430 aaKnown RBP5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 TNFRSF1AP19438 455 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 PTPN7P35236 360 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 GNALP38405 381 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 SLC6A9P48067 706 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 FOXE3Q13461 319 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 ZNF267Q14586 743 aaPredicted RBP5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 BMT2Q1RMZ1 405 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 C3orf36Q3SXR2 165 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 NRN1LQ496H8 165 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 MIIPQ5JXC2 388 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 B3GNT9Q6UX72 402 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 DGKHQ86XP1 1220 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 CAMKK1Q8N5S9 505 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 REPS2Q8NFH8 660 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 OR2I1PQ8NGU4 316 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 DIS3LQ8TF46 1054 aaKnown RBP5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 TAAR9Q96RI9 348 aa5.89□□□□□ -1.47
SMNDC1-205ENST00000477763 SENP6Q9GZR1 1112 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms