RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 AXDND1Q5T1B0 1012 aaPredicted RBP22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 LAIR1Q6GTX8 287 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 GALNT17Q6IS24 598 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 BLOC1S2Q6QNY1 142 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 KRT25Q7Z3Z0 450 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 CEP57Q86XR8 500 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 FAM177A1Q8N128 213 aaPredicted RBP22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 ZNF687Q8N1G0 1237 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 ASAP3Q8TDY4 903 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 ING5Q8WYH8 240 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 DNASE1L2Q92874 299 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 KCNB2Q92953 911 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 ZSWIM4Q9H7M6 989 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 HEBP1Q9NRV9 189 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 GDE1Q9NZC3 331 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 RGL1Q9NZL6 768 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 DNMT3BQ9UBC3 853 aaKnown RBP22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 PARP2Q9UGN5 583 aa22.48■■□□□ 1.19
PDLIM1-202ENST00000477757 CASTOR2A6NHX0 329 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 SLC30A4O14863 429 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 ZBTB39O15060 712 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 LRP3O75074 770 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 SPEM2Q0P670 501 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 RAB33AQ14088 237 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 UVSSAQ2YD98 709 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 RTL10Q7L3V2 364 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 CDR2LQ86X02 465 aaPredicted RBP22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 IER2Q9BTL4 223 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 CHRDQ9H2X0 955 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 RAB23Q9ULC3 237 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 VWA8A3KMH1 1905 aa22.47■■□□□ 1.19
PDLIM1-202ENST00000477757 COL4A2P08572 1712 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 A0A1B0GUA9 196 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 TBX3O15119 743 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 GCFC2P16383 781 aaKnown RBP22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 RPS6KB1P23443 525 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 PDIA3P30101 505 aaKnown RBP22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 NRLP54845 237 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 EVCP57679 992 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 CCT2P78371 535 aaKnown RBP22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 PPP4R3AQ6IN85 833 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 MAMSTRQ6ZN01 415 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 DYDC2Q96IM9 177 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 PLA2G2FQ9BZM2 168 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 MRPS23Q9Y3D9 190 aaKnown RBP22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 CACNA1GO43497 2377 aa22.46■■□□□ 1.19
PDLIM1-202ENST00000477757 PTGESO14684 152 aa22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 DEXIO95424 95 aa22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 ARL2P36404 184 aa22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 CYP4A11Q02928 519 aa22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 SPIRE1Q08AE8 756 aa22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 CTTNQ14247 550 aaKnown RBP22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 SLC5A9Q2M3M2 681 aa22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 CELF5Q8N6W0 485 aaKnown RBP22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 HAS1Q92839 578 aa22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 ELSPBP1Q96BH3 223 aa22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 AVENQ9NQS1 362 aaPredicted RBP22.45■■□□□ 1.18
PDLIM1-202ENST00000477757 RETP07949 1114 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 GLRA2P23416 452 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 SSRP1Q08945 709 aaKnown RBP22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 PPP2R5DQ14738 602 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 NAB2Q15742 525 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 LPAL2Q16609 132 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 NCAPH2Q6IBW4 605 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 NEK8Q86SG6 692 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 MTRRQ9UBK8 725 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 SNX14Q9Y5W7 946 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 CEP295Q9C0D2 2601 aa22.44■■□□□ 1.18
PDLIM1-202ENST00000477757 F5P12259 2224 aa22.43■■□□□ 1.18
PDLIM1-202ENST00000477757 DGAT1O75907 488 aa22.43■■□□□ 1.18
PDLIM1-202ENST00000477757 RHOP08100 348 aa22.43■■□□□ 1.18
PDLIM1-202ENST00000477757 FCARP24071 287 aa22.43■■□□□ 1.18
PDLIM1-202ENST00000477757 OR1D2P34982 312 aa22.43■■□□□ 1.18
PDLIM1-202ENST00000477757 TANGO2Q6ICL3 276 aa22.43■■□□□ 1.18
PDLIM1-202ENST00000477757 MCRS1Q96EZ8 462 aa22.43■■□□□ 1.18
PDLIM1-202ENST00000477757 NDRG2Q9UN36 371 aaKnown RBP22.43■■□□□ 1.18
PDLIM1-202ENST00000477757 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 MAN2B1O00754 1011 aa22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 THP07101 528 aa22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 CEBPBP17676 345 aa22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 FGFR3P22607 806 aa22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 CCR3P51677 355 aa22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 POTEHQ6S545 545 aa22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 PPP4R3CPQ6ZMV5 832 aa22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 PRIMPOLQ96LW4 560 aa22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 AIFM3Q96NN9 605 aa22.42■■□□□ 1.18
PDLIM1-202ENST00000477757 CCDC194A0A1B0GVG4 234 aa22.41■■□□□ 1.18
PDLIM1-202ENST00000477757 LYPLA2O95372 231 aa22.41■■□□□ 1.18
PDLIM1-202ENST00000477757 HSPA4P34932 840 aa22.41■■□□□ 1.18
PDLIM1-202ENST00000477757 POTEDQ86YR6 584 aa22.41■■□□□ 1.18
PDLIM1-202ENST00000477757 TPH2Q8IWU9 490 aa22.41■■□□□ 1.18
PDLIM1-202ENST00000477757 CHAMP1Q96JM3 812 aa22.41■■□□□ 1.18
PDLIM1-202ENST00000477757 POLR3FQ9H1D9 316 aaPredicted RBP22.41■■□□□ 1.18
PDLIM1-202ENST00000477757 SEMA4GQ9NTN9 838 aa22.41■■□□□ 1.18
PDLIM1-202ENST00000477757 CDY1Q9Y6F8 540 aa22.41■■□□□ 1.18
PDLIM1-202ENST00000477757 TMEM189-UBE2V1I3L0A0 370 aa22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 CCNT1O60563 726 aaKnown RBP22.4■■□□□ 1.18
PDLIM1-202ENST00000477757 CDC45O75419 566 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms