RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 MSTO1Q9BUK6 570 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 PCIF1Q9H4Z3 704 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 CGNQ9P2M7 1197 aaKnown RBP18.34■□□□□ 0.53
EPHB4-204ENST00000477446 AGO2Q9UKV8 859 aaKnown RBP18.34■□□□□ 0.53
EPHB4-204ENST00000477446 TRAF3IP3Q9Y228 551 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.34■□□□□ 0.53
EPHB4-204ENST00000477446 ZSCAN12O43309 604 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 FAM189A1O60320 539 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 TPM1P09493 284 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 EEF1GP26641 437 aaKnown RBP18.33■□□□□ 0.52
EPHB4-204ENST00000477446 PBX1P40424 430 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 OSTNP61366 133 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 TRIM14Q14142 442 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 ZCWPW2Q504Y3 356 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 SEZ6Q53EL9 994 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 TCP11X2Q5H9J9 407 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 CENPPQ6IPU0 288 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 NPAS4Q8IUM7 802 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 TMEM192Q8IY95 271 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 ZSWIM2Q8NEG5 633 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 PGBD4Q96DM1 585 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 C16orf45Q96MC5 204 aaPredicted RBP18.33■□□□□ 0.52
EPHB4-204ENST00000477446 PANX2Q96RD6 677 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 APOL6Q9BWW8 343 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 NAA15Q9BXJ9 866 aaKnown RBP18.33■□□□□ 0.52
EPHB4-204ENST00000477446 SNTG2Q9NY99 539 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 LRFN2Q9ULH4 789 aa18.33■□□□□ 0.52
EPHB4-204ENST00000477446 RANBP2P49792 3224 aaKnown RBP18.32■□□□□ 0.52
EPHB4-204ENST00000477446 GOLGA6L9A6NEM1 432 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 AKR1B15C9JRZ8 316 aaPredicted RBP18.32■□□□□ 0.52
EPHB4-204ENST00000477446 OGTO15294 1046 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 STAG3L1P0CL83 205 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 ITGA4P13612 1032 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 ATP2A2P16615 1042 aaKnown RBP18.32■□□□□ 0.52
EPHB4-204ENST00000477446 AKAP5P24588 427 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 CCNE1P24864 410 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 GRM5P41594 1212 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 PMS1P54277 932 aaKnown RBP18.32■□□□□ 0.52
EPHB4-204ENST00000477446 HSP90AA4PQ58FG1 418 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 ZBTB41Q5SVQ8 909 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 CEP135Q66GS9 1140 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 E4F1Q66K89 784 aaPredicted RBP18.32■□□□□ 0.52
EPHB4-204ENST00000477446 FOXR2Q6PJQ5 311 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 AGMOQ6ZNB7 445 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 FAM114A1Q8IWE2 563 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 C12orf56Q8IXR9 622 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 GOLGA5Q8TBA6 731 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 PHOSPHO2Q8TCD6 241 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 P2RX5Q93086 422 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 SLC9A7Q96T83 725 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
EPHB4-204ENST00000477446 HSPBP1Q9NZL4 362 aa18.32■□□□□ 0.52
EPHB4-204ENST00000477446 TRIM49BA6NDI0 452 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 KCNJ18B7U540 433 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 CALUO43852 315 aaPredicted RBP18.31■□□□□ 0.52
EPHB4-204ENST00000477446 FGFR1P11362 822 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 TNFSF9P41273 254 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 COPB1P53618 953 aaKnown RBP18.31■□□□□ 0.52
EPHB4-204ENST00000477446 KCNJ12Q14500 433 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 ANKRD40Q6AI12 368 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 FAM117BQ6P1L5 589 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 HACE1Q8IYU2 909 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 TDHQ8IZJ6 230 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 SAAL1Q96ER3 474 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 BAG1Q99933 345 aaPredicted RBP18.31■□□□□ 0.52
EPHB4-204ENST00000477446 CCDC94Q9BW85 323 aaPredicted RBP18.31■□□□□ 0.52
EPHB4-204ENST00000477446 RNF19AQ9NV58 838 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 MAGEC2Q9UBF1 373 aaPredicted RBP18.31■□□□□ 0.52
EPHB4-204ENST00000477446 PARP2Q9UGN5 583 aa18.31■□□□□ 0.52
EPHB4-204ENST00000477446 GOLGA8IPA6NC78 632 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 GOLGA8JA6NMD2 632 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 CITO14578 2027 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 ACOT2P49753 483 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 CYP2J2P51589 502 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 KRT31Q15323 416 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 CRELD2Q6UXH1 353 aaPredicted RBP18.3■□□□□ 0.52
EPHB4-204ENST00000477446 HERC6Q8IVU3 1022 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 TC2NQ8N9U0 490 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 TMEM174Q8WUU8 243 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 FAM213AQ9BRX8 229 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 DMAC2Q9NW81 257 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 TRIP11Q15643 1979 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 FNDC1Q4ZHG4 1894 aaPredicted RBP18.3■□□□□ 0.52
EPHB4-204ENST00000477446 KIAA0391O15091 583 aaKnown RBP18.3■□□□□ 0.52
EPHB4-204ENST00000477446 DGKIO75912 1065 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 RECQL4O94761 1208 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 GJB5O95377 273 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 FGFR1OPO95684 399 aaKnown RBP18.3■□□□□ 0.52
EPHB4-204ENST00000477446 LDHAP00338 332 aaKnown RBP18.3■□□□□ 0.52
EPHB4-204ENST00000477446 NR3C1P04150 777 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 CLTAP09496 248 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 GATMP50440 423 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 KYAT1Q16773 422 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 EDRF1Q3B7T1 1238 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 CLLU1OSQ5K130 101 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 FAM109BQ6ICB4 259 aaPredicted RBP18.3■□□□□ 0.52
EPHB4-204ENST00000477446 CNGA4Q8IV77 575 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 SLC9A9Q8IVB4 645 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 GPD1LQ8N335 351 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 ACAP3Q96P50 834 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms