RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 MICAL1Q8TDZ2 1067 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 PPM1EQ8WY54 764 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 SNX27Q96L92 541 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 ACCSQ96QU6 501 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 APOL6Q9BWW8 343 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 ZBP1Q9H171 429 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 TLE6Q9H808 572 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 ENTPD7Q9NQZ7 604 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 CHST7Q9NS84 486 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 MARCH5Q9NX47 278 aa13.5□□□□□ -0.25
CLCNKA-205ENST00000477360 SF3B1O75533 1304 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 SMIM28A0A1B0GU29 152 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 TTC26A0AVF1 554 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 C2orf71A6NGG8 1288 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 FAM189A1O60320 539 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 B4GALT3O60512 393 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 IDEP14735 1019 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 HOXB8P17481 243 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 GARTP22102 1010 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 NMT1P30419 496 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 IRS1P35568 1242 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 OR1G1P47890 313 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 EHHADHQ08426 723 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 PSMD2Q13200 908 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 KANK3Q6NY19 840 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 PDXDC1Q6P996 788 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 TMEM173Q86WV6 379 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 NT5DC4Q86YG4 428 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 VPS52Q8N1B4 723 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 TMEM174Q8WUU8 243 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 HERC2P3Q9BVR0 1158 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 GBP3Q9H0R5 595 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 ASB7Q9H672 318 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 CGNQ9P2M7 1197 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 ANKFY1Q9P2R3 1169 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 ADAM28Q9UKQ2 775 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 USP20Q9Y2K6 914 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 GDAQ9Y2T3 454 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 DERAQ9Y315 318 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 MYH11P35749 1972 aa13.49□□□□□ -0.25
CLCNKA-205ENST00000477360 TRAPPC3O43617 180 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 ACTN4O43707 911 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 LILRB3O75022 631 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 GCNT3O95395 438 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 LDHAP00338 332 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 PFKFB1P16118 471 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 PBX3P40426 434 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 SYKP43405 635 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 DSG1Q02413 1049 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 COASYQ13057 564 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 BMT2Q1RMZ1 405 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 SLC10A6Q3KNW5 377 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 USP41Q3LFD5 358 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 DCLRE1AQ6PJP8 1040 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 EPM2AIP1Q7L775 607 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 ZNF507Q8TCN5 953 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 CHAMP1Q96JM3 812 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 EMILIN2Q9BXX0 1053 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 MRPL17Q9NRX2 175 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 KLK14Q9P0G3 267 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 DPP7Q9UHL4 492 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 CPSF3Q9UKF6 684 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 BRWD1Q9NSI6 2320 aa13.48□□□□□ -0.25
CLCNKA-205ENST00000477360 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 NT5C1B-RDH14C9J2C7 533 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 TADA2AO75478 443 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 CXCL14O95715 111 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 URODP06132 367 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 LTBRP36941 435 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 ASIC1P78348 528 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 PTPN14Q15678 1187 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 ZBTB6Q15916 424 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 UPP1Q16831 310 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 ZC2HC1CQ53FD0 456 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 FAM26FQ5R3K3 315 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 KIAA0319Q5VV43 1072 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 FUT10Q6P4F1 479 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 SLC39A4Q6P5W5 647 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 ZBTB33Q86T24 672 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 ELOA2Q8IYF1 753 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 CEP120Q8N960 986 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 HDAC7Q8WUI4 952 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 BCL7CQ8WUZ0 217 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 ZBTB45Q96K62 511 aaPredicted RBP13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 MSLNLQ96KJ4 702 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 GBP4Q96PP9 640 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 MSTO1Q9BUK6 570 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 VN1R3Q9BXE9 311 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 HAPLN2Q9GZV7 340 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 RXFP1Q9HBX9 757 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 KIAA1586Q9HCI6 787 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 DZANK1Q9NVP4 752 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 FNIP2Q9P278 1114 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 PRKAG3Q9UGI9 489 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 C2CD2Q9Y426 696 aa13.47□□□□□ -0.25
CLCNKA-205ENST00000477360 MYO7AQ13402 2215 aa13.46□□□□□ -0.25
CLCNKA-205ENST00000477360 A0A1B0GVL5 298 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms