RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SLFN14P0C7P3 912 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 CXCL8P10145 99 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 GAP43P17677 238 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 OR1G1P47890 313 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 LIG4P49917 911 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 PLCB3Q01970 1234 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 NOLC1Q14978 699 aaKnown RBP eCLIP13.61□□□□□ -0.23
APTX-220ENST00000476858 SKIV2LQ15477 1246 aaKnown RBP13.61□□□□□ -0.23
APTX-220ENST00000476858 ZPBP2Q6X784 338 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 C3orf58Q8NDZ4 430 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 ERCC4Q92889 916 aaPredicted RBP13.61□□□□□ -0.23
APTX-220ENST00000476858 SNX27Q96L92 541 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 PPP1R10Q96QC0 940 aaKnown RBP13.61□□□□□ -0.23
APTX-220ENST00000476858 CUEDC2Q9H467 287 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 IGFLR1Q9H665 355 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 LMCD1Q9NZU5 365 aa13.61□□□□□ -0.23
APTX-220ENST00000476858 A0A0B4J269 797 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 SMIM28A0A1B0GU29 152 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 A0A1W2PQ27 194 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 A0A1W2PQ64 194 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 A0A1W2PQD8 194 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 GLP2RO95838 553 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 LTBRP36941 435 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 ALDH7A1P49419 539 aaKnown RBP13.6□□□□□ -0.23
APTX-220ENST00000476858 KCNQ1P51787 676 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 NUBP1P53384 320 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 GRIK3Q13003 919 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 ENOX2Q16206 610 aaKnown RBP13.6□□□□□ -0.23
APTX-220ENST00000476858 XKR4Q5GH76 650 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 L1TD1Q5T7N2 865 aaKnown RBP13.6□□□□□ -0.23
APTX-220ENST00000476858 CNNM4Q6P4Q7 775 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 CRELD2Q6UXH1 353 aaPredicted RBP13.6□□□□□ -0.23
APTX-220ENST00000476858 EPM2AIP1Q7L775 607 aaPredicted RBP13.6□□□□□ -0.23
APTX-220ENST00000476858 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 GPR62Q9BZJ7 368 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 LMAN2LQ9H0V9 348 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 ZBP1Q9H171 429 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 NSUN3Q9H649 340 aaKnown RBP13.6□□□□□ -0.23
APTX-220ENST00000476858 UBN1Q9NPG3 1134 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 TLR9Q9NR96 1032 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 AAASQ9NRG9 546 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 OLFML3Q9NRN5 406 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 TUBGCP4Q9UGJ1 667 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 PCDHB13Q9Y5F0 798 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 ATP6V1DQ9Y5K8 247 aa13.6□□□□□ -0.23
APTX-220ENST00000476858 I3L4J1 428 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 CLDN3O15551 220 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 TBX10O75333 385 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 KIF4AO95239 1232 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 ANP32AP39687 249 aaKnown RBP13.59□□□□□ -0.23
APTX-220ENST00000476858 MATR3P43243 847 aaKnown RBP eCLIP13.59□□□□□ -0.238e-7■■■■□ 24.4
APTX-220ENST00000476858 SYKP43405 635 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 NRIP1P48552 1158 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 ACOT2P49753 483 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 SNW1Q13573 536 aaKnown RBP13.59□□□□□ -0.23
APTX-220ENST00000476858 PTPROQ16827 1216 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.59□□□□□ -0.23
APTX-220ENST00000476858 CCDC65Q8IXS2 484 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 FMR1NBQ8N0W7 255 aaPredicted RBP13.59□□□□□ -0.23
APTX-220ENST00000476858 ENGASEQ8NFI3 743 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 MICAL1Q8TDZ2 1067 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 SAAL1Q96ER3 474 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 RPS6KC1Q96S38 1066 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 TMEM175Q9BSA9 504 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 MSTO1Q9BUK6 570 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 PCIF1Q9H4Z3 704 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 SLC39A2Q9NP94 309 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 CDH22Q9UJ99 828 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 STYXL1Q9Y6J8 313 aa13.59□□□□□ -0.23
APTX-220ENST00000476858 TTC26A0AVF1 554 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 GOLGA8IPA6NC78 632 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 GOLGA8JA6NMD2 632 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 LACTBL1A8MY62 500 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 H3BQ06 376 aaPredicted RBP13.58□□□□□ -0.24
APTX-220ENST00000476858 PPEF2O14830 753 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 ZNF202O95125 648 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 ALDH2P05091 517 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 THP07101 528 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 CLCNKBP51801 687 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 STK4Q13043 487 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 TUSC3Q13454 348 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 COL19A1Q14993 1142 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 CLUL1Q15846 466 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 KMT5BQ4FZB7 885 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 TIGD5Q53EQ6 642 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 FAM26FQ5R3K3 315 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 KANK3Q6NY19 840 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 UNC13DQ70J99 1090 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 DDX53Q86TM3 631 aaKnown RBP13.58□□□□□ -0.24
APTX-220ENST00000476858 NELFCDQ8IXH7 590 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 HACE1Q8IYU2 909 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 RNF168Q8IYW5 571 aaPredicted RBP13.58□□□□□ -0.24
APTX-220ENST00000476858 KIAA0895Q8NCT3 520 aa13.58□□□□□ -0.24
APTX-220ENST00000476858 SCFD1Q8WVM8 642 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms