RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 KAT5Q92993 513 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 CCDC127Q96BQ5 260 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 ZSWIM1Q9BR11 485 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 KIAA1586Q9HCI6 787 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 UVRAGQ9P2Y5 699 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 RASAL2Q9UJF2 1139 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 GRIN2DO15399 1336 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 CYP1A2P05177 515 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 MYZAPP0CAP1 466 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 CYP11B1P15538 503 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 CTNNA1P35221 906 aaKnown RBP17.67■□□□□ 0.42
TMEM53-208ENST00000476724 PDE6CP51160 858 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 CDR2Q01850 454 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 CYP24A1Q07973 514 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 BIRC3Q13489 604 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 GNPTABQ3T906 1256 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 KCTD16Q68DU8 428 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 FOXR1Q6PIV2 292 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 ALG3Q92685 438 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 SAAL1Q96ER3 474 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 IFT74Q96LB3 600 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 ERP44Q9BS26 406 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 FAM107BQ9H098 131 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 NEUROG2Q9H2A3 272 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 GTF3C4Q9UKN8 822 aa17.67■□□□□ 0.42
TMEM53-208ENST00000476724 ARID2Q68CP9 1835 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 H0YGN5 161 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 MYO1CO00159 1063 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 ZNF862O60290 1169 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 SLC25A27O95847 323 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 NR1D1P20393 614 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 CHRNA3P32297 505 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 GBP1P32455 592 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 FMO1Q01740 532 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 SEPT14Q6ZU15 432 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 SLC47A2Q86VL8 602 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 BCAS4Q8TDM0 211 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 BSNDQ8WZ55 320 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 FGD4Q96M96 766 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 RUNDC3BQ96NL0 473 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 JPH1Q9HDC5 661 aaPredicted RBP17.66■□□□□ 0.42
TMEM53-208ENST00000476724 SLC9A2Q9UBY0 812 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 NFS1Q9Y697 457 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 MCM3APO60318 1980 aa17.66■□□□□ 0.42
TMEM53-208ENST00000476724 CCL15-CCL14A0A0B4J2E2 113 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 UNCXA6NJT0 531 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 SRRM3A6NNA2 597 aaPredicted RBP17.65■□□□□ 0.42
TMEM53-208ENST00000476724 BTBD19C9JJ37 291 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 KIAA0391O15091 583 aaKnown RBP17.65■□□□□ 0.42
TMEM53-208ENST00000476724 ZEB2O60315 1214 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 EDNRBP24530 442 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 PEX5P50542 639 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 GCNT1Q02742 428 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 UAP1Q16222 522 aaPredicted RBP17.65■□□□□ 0.42
TMEM53-208ENST00000476724 CCL15Q16663 113 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 SEL1L2Q5TEA6 688 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 DUPD1Q68J44 220 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 SWSAP1Q6NVH7 229 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 TMC3Q7Z5M5 1100 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 BRI3BPQ8WY22 251 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 KCNN1Q92952 543 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 CELF4Q9BZC1 486 aaKnown RBP17.65■□□□□ 0.42
TMEM53-208ENST00000476724 PORCNQ9H237 461 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 ATP6V0A4Q9HBG4 840 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 NR2E1Q9Y466 385 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 PDHXO00330 501 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 PODXLO00592 558 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 PHF2O75151 1096 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 COMTP21964 271 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 FKBP1BP68106 108 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 WDR78Q5VTH9 848 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 MIS18BP1Q6P0N0 1132 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 SLC39A4Q6P5W5 647 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 SV2AQ7L0J3 742 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 EEPD1Q7L9B9 569 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 SH2D3CQ8N5H7 860 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 KIFC3Q9BVG8 833 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 CYP26B1Q9NR63 512 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 TRPC6Q9Y210 931 aa17.65■□□□□ 0.42
TMEM53-208ENST00000476724 TULP1O00294 542 aaPredicted RBP17.64■□□□□ 0.41
TMEM53-208ENST00000476724 EBAG9O00559 213 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 HNRNPDLO14979 420 aaKnown RBP17.64■□□□□ 0.41
TMEM53-208ENST00000476724 MMEP08473 750 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 CTNNA2P26232 953 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 ICAM3P32942 547 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 EIF3BP55884 814 aaKnown RBP17.64■□□□□ 0.41
TMEM53-208ENST00000476724 ZNF211Q13398 564 aaPredicted RBP17.64■□□□□ 0.41
TMEM53-208ENST00000476724 MESDQ14696 234 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 AGBL2Q5U5Z8 902 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 NAA35Q5VZE5 725 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 CST9Q5W186 159 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 ACAD10Q6JQN1 1059 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 ABHD15Q6UXT9 468 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 C2orf69Q8N8R5 385 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 ZNF564Q8TBZ8 553 aaPredicted RBP17.64■□□□□ 0.41
TMEM53-208ENST00000476724 TAS1R2Q8TE23 839 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 UBLCP1Q8WVY7 318 aaPredicted RBP17.64■□□□□ 0.41
TMEM53-208ENST00000476724 CD101Q93033 1021 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 FMO2Q99518 471 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 EFCC1Q9HA90 598 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms